LIG3 Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with LIG3 Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with LIG3 Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with LIG3 Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with LIG3 Up.

Results found

Linked to

	Label	Description
	GAR1 Gene (Entity type)	ENSG00000109534 - GAR1 ribonucleoprotein
	NXT1 Gene (Entity type)	ENSG00000132661 - nuclear transport factor 2 like export factor 1
	MEP1A Gene (Entity type)	ENSG00000112818 - meprin A subunit alpha
	FANCL Gene (Entity type)	ENSG00000115392 - FA complementation group L
	PRELID3B Gene (Entity type)	ENSG00000101166 - PRELI domain containing 3B
	ZNF133 Gene (Entity type)	ENSG00000125846 - zinc finger protein 133
	BICD1 Gene (Entity type)	ENSG00000151746 - BICD cargo adaptor 1
	MINDY3 Gene (Entity type)	ENSG00000148481 - MINDY lysine 48 deubiquitinase 3
	RGS20 Gene (Entity type)	ENSG00000147509 - regulator of G protein signaling 20
	GUCA2B Gene (Entity type)	ENSG00000044012 - guanylate cyclase activator 2B

GAR1

Gene (Entity type)

ENSG00000109534 - GAR1 ribonucleoprotein

NXT1

Gene (Entity type)

ENSG00000132661 - nuclear transport factor 2 like export factor 1

MEP1A

Gene (Entity type)

ENSG00000112818 - meprin A subunit alpha

FANCL

Gene (Entity type)

ENSG00000115392 - FA complementation group L

PRELID3B

Gene (Entity type)

ENSG00000101166 - PRELI domain containing 3B

ZNF133

Gene (Entity type)

ENSG00000125846 - zinc finger protein 133

BICD1

Gene (Entity type)

ENSG00000151746 - BICD cargo adaptor 1

MINDY3

Gene (Entity type)

ENSG00000148481 - MINDY lysine 48 deubiquitinase 3

RGS20

Gene (Entity type)

ENSG00000147509 - regulator of G protein signaling 20

GUCA2B

Gene (Entity type)

ENSG00000044012 - guanylate cyclase activator 2B

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Community

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.