TPM4 Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with TPM4 Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with TPM4 Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with TPM4 Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with TPM4 Up.

Results found

Linked to

	Label	Description
	PSEN1 Gene (Entity type)	ENSG00000080815 - presenilin 1
	UBAP2 Gene (Entity type)	ENSG00000137073 - ubiquitin associated protein 2
	TTC17 Gene (Entity type)	ENSG00000052841 - tetratricopeptide repeat domain 17
	TUG1 Gene (Entity type)	ENSG00000253352 - taurine up-regulated 1
	PREPL Gene (Entity type)	ENSG00000138078 - prolyl endopeptidase like
	RGS20 Gene (Entity type)	ENSG00000147509 - regulator of G protein signaling 20
	SMG7 Gene (Entity type)	ENSG00000116698 - SMG7 nonsense mediated mRNA decay factor
	TRIP12 Gene (Entity type)	ENSG00000153827 - thyroid hormone receptor interactor 12
	RANBP2 Gene (Entity type)	ENSG00000153201 - RAN binding protein 2
	ATAD2B Gene (Entity type)	ENSG00000119778 - ATPase family AAA domain containing 2B

PSEN1

Gene (Entity type)

ENSG00000080815 - presenilin 1

UBAP2

Gene (Entity type)

ENSG00000137073 - ubiquitin associated protein 2

TTC17

Gene (Entity type)

ENSG00000052841 - tetratricopeptide repeat domain 17

TUG1

Gene (Entity type)

ENSG00000253352 - taurine up-regulated 1

PREPL

Gene (Entity type)

ENSG00000138078 - prolyl endopeptidase like

RGS20

Gene (Entity type)

ENSG00000147509 - regulator of G protein signaling 20

SMG7

Gene (Entity type)

ENSG00000116698 - SMG7 nonsense mediated mRNA decay factor

TRIP12

Gene (Entity type)

ENSG00000153827 - thyroid hormone receptor interactor 12

RANBP2

Gene (Entity type)

ENSG00000153201 - RAN binding protein 2

ATAD2B

Gene (Entity type)

ENSG00000119778 - ATPase family AAA domain containing 2B

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Community

Resources

@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.