GSE140322 imatinib K-562 C.M.L. 3 v 2 human dn (Gene Set)

Dcc Asset:

rummageo chemical perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE140322_imatinib_K-562 C.M.L._3_v_2_human_dn.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE140322_imatinib_K-562 C.M.L._3_v_2_human_dn.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE140322_imatinib_K-562 C.M.L._3_v_2_human_dn.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE140322_imatinib_K-562 C.M.L._3_v_2_human_dn.

Results found

Linked to

	Label	Description
	ARHGAP23 Gene (Entity type)	Rho GTPase activating protein 23
	H3-3A Gene (Entity type)	H3.3 histone A
	LINC00205 Gene (Entity type)	long intergenic non-protein coding RNA 205
	GTF2IP4 Gene (Entity type)	general transcription factor IIi pseudogene 4
	LINC01291 Gene (Entity type)	long intergenic non-protein coding RNA 1291
	LOC389906 Gene (Entity type)	zinc finger protein 839 pseudogene
	LINC00667 Gene (Entity type)	long intergenic non-protein coding RNA 667
	DUBR Gene (Entity type)	DPPA2 upstream binding RNA
	UCA1 Gene (Entity type)	urothelial cancer associated 1
	LINC00839 Gene (Entity type)	long intergenic non-protein coding RNA 839

ARHGAP23

Gene (Entity type)

Rho GTPase activating protein 23

H3-3A

Gene (Entity type)

H3.3 histone A

LINC00205

Gene (Entity type)

long intergenic non-protein coding RNA 205

GTF2IP4

Gene (Entity type)

general transcription factor IIi pseudogene 4

LINC01291

Gene (Entity type)

long intergenic non-protein coding RNA 1291

LOC389906

Gene (Entity type)

zinc finger protein 839 pseudogene

LINC00667

Gene (Entity type)

long intergenic non-protein coding RNA 667

DUBR

Gene (Entity type)

DPPA2 upstream binding RNA

UCA1

Gene (Entity type)

urothelial cancer associated 1

LINC00839

Gene (Entity type)

long intergenic non-protein coding RNA 839

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.