EDA Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with EDA Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with EDA Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with EDA Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with EDA Up.

Results found

Linked to

	Label	Description
	MAD1L1 Gene (Entity type)	ENSG00000002822 - mitotic arrest deficient 1 like 1
	POLR2J2 Gene (Entity type)	ENSG00000228049 - RNA polymerase II subunit J2
	CLPTM1 Gene (Entity type)	ENSG00000104853 - CLPTM1 regulator of GABA type A receptor forward trafficking
	STAG3 Gene (Entity type)	ENSG00000066923 - STAG3 cohesin complex component
	CD22 Gene (Entity type)	ENSG00000012124 - CD22 molecule
	ATG16L1 Gene (Entity type)	ENSG00000085978 - autophagy related 16 like 1
	SMG7 Gene (Entity type)	ENSG00000116698 - SMG7 nonsense mediated mRNA decay factor
	EVX1 Gene (Entity type)	ENSG00000106038 - even-skipped homeobox 1
	ATP2B2 Gene (Entity type)	ENSG00000157087 - ATPase plasma membrane Ca2+ transporting 2
	CXCR5 Gene (Entity type)	ENSG00000160683 - C-X-C motif chemokine receptor 5

MAD1L1

Gene (Entity type)

ENSG00000002822 - mitotic arrest deficient 1 like 1

POLR2J2

Gene (Entity type)

ENSG00000228049 - RNA polymerase II subunit J2

CLPTM1

Gene (Entity type)

ENSG00000104853 - CLPTM1 regulator of GABA type A receptor forward trafficking

STAG3

Gene (Entity type)

ENSG00000066923 - STAG3 cohesin complex component

CD22

Gene (Entity type)

ENSG00000012124 - CD22 molecule

ATG16L1

Gene (Entity type)

ENSG00000085978 - autophagy related 16 like 1

SMG7

Gene (Entity type)

ENSG00000116698 - SMG7 nonsense mediated mRNA decay factor

EVX1

Gene (Entity type)

ENSG00000106038 - even-skipped homeobox 1

ATP2B2

Gene (Entity type)

ENSG00000157087 - ATPase plasma membrane Ca2+ transporting 2

CXCR5

Gene (Entity type)

ENSG00000160683 - C-X-C motif chemokine receptor 5

DISPLAY PER PAGE

CFDE Workbench

Consortium

Community

Resources

@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.