GCAT Down (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GCAT Down.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GCAT Down.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GCAT Down.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GCAT Down.

Results found

Linked to

	Label	Description
	APOBEC3A Gene (Entity type)	ENSG00000128383 - apolipoprotein B mRNA editing enzyme catalytic subunit 3A
	BABAM2 Gene (Entity type)	ENSG00000158019 - BRISC and BRCA1 A complex member 2
	NXF3 Gene (Entity type)	ENSG00000147206 - nuclear RNA export factor 3
	RGS20 Gene (Entity type)	ENSG00000147509 - regulator of G protein signaling 20
	UPF3B Gene (Entity type)	ENSG00000125351 - UPF3B regulator of nonsense mediated mRNA decay
	ADNP2 Gene (Entity type)	ENSG00000101544 - ADNP homeobox 2
	INSL4 Gene (Entity type)	ENSG00000120211 - insulin like 4
	PANX1 Gene (Entity type)	ENSG00000110218 - pannexin 1
	SP140L Gene (Entity type)	ENSG00000185404 - SP140 like nuclear body protein
	TRIM21 Gene (Entity type)	ENSG00000132109 - tripartite motif containing 21

APOBEC3A

Gene (Entity type)

ENSG00000128383 - apolipoprotein B mRNA editing enzyme catalytic subunit 3A

BABAM2

Gene (Entity type)

ENSG00000158019 - BRISC and BRCA1 A complex member 2

NXF3

Gene (Entity type)

ENSG00000147206 - nuclear RNA export factor 3

RGS20

Gene (Entity type)

ENSG00000147509 - regulator of G protein signaling 20

UPF3B

Gene (Entity type)

ENSG00000125351 - UPF3B regulator of nonsense mediated mRNA decay

ADNP2

Gene (Entity type)

ENSG00000101544 - ADNP homeobox 2

INSL4

Gene (Entity type)

ENSG00000120211 - insulin like 4

PANX1

Gene (Entity type)

ENSG00000110218 - pannexin 1

SP140L

Gene (Entity type)

ENSG00000185404 - SP140 like nuclear body protein

TRIM21

Gene (Entity type)

ENSG00000132109 - tripartite motif containing 21

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Community

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.