RAB39A Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with RAB39A Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with RAB39A Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with RAB39A Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with RAB39A Up.

Results found

Linked to

	Label	Description
	PHIP Gene (Entity type)	ENSG00000146247 - PHIP subunit of CUL4-Ring ligase complex
	SF3B2 Gene (Entity type)	ENSG00000087365 - splicing factor 3b subunit 2
	XPO6 Gene (Entity type)	ENSG00000169180 - exportin 6
	NUDC Gene (Entity type)	ENSG00000090273 - nuclear distribution C, dynein complex regulator
	NKTR Gene (Entity type)	ENSG00000114857 - natural killer cell triggering receptor
	PSMD4 Gene (Entity type)	ENSG00000159352 - proteasome 26S subunit ubiquitin receptor, non-ATPase 4
	TNK2 Gene (Entity type)	ENSG00000061938 - tyrosine kinase non receptor 2
	DPF2 Gene (Entity type)	ENSG00000133884 - double PHD fingers 2
	REX1BD Gene (Entity type)	ENSG00000006015 - required for excision 1-B domain containing
	SEC16A Gene (Entity type)	ENSG00000148396 - SEC16 homolog A, endoplasmic reticulum export factor

PHIP

Gene (Entity type)

ENSG00000146247 - PHIP subunit of CUL4-Ring ligase complex

SF3B2

Gene (Entity type)

ENSG00000087365 - splicing factor 3b subunit 2

XPO6

Gene (Entity type)

ENSG00000169180 - exportin 6

NUDC

Gene (Entity type)

ENSG00000090273 - nuclear distribution C, dynein complex regulator

NKTR

Gene (Entity type)

ENSG00000114857 - natural killer cell triggering receptor

PSMD4

Gene (Entity type)

ENSG00000159352 - proteasome 26S subunit ubiquitin receptor, non-ATPase 4

TNK2

Gene (Entity type)

ENSG00000061938 - tyrosine kinase non receptor 2

DPF2

Gene (Entity type)

ENSG00000133884 - double PHD fingers 2

REX1BD

Gene (Entity type)

ENSG00000006015 - required for excision 1-B domain containing

SEC16A

Gene (Entity type)

ENSG00000148396 - SEC16 homolog A, endoplasmic reticulum export factor

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Community

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.