NPPB up (Gene Set)

Dcc Asset:

LINCS L1000 Consensus Median Signatures.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with NPPB up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with NPPB up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with NPPB up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with NPPB up.

Results found

Linked to

	Label	Description
	STOML2 Gene (Entity type)	ENSG00000165283 - stomatin like 2
	OTC Gene (Entity type)	ENSG00000036473 - ornithine transcarbamylase
	VPS4B Gene (Entity type)	ENSG00000119541 - vacuolar protein sorting 4 homolog B
	RNF38 Gene (Entity type)	ENSG00000137075 - ring finger protein 38
	ADAM8 Gene (Entity type)	ENSG00000151651 - ADAM metallopeptidase domain 8
	CYP3A4 Gene (Entity type)	ENSG00000160868 - cytochrome P450 family 3 subfamily A member 4
	C9 Gene (Entity type)	ENSG00000113600 - complement C9
	HK3 Gene (Entity type)	ENSG00000160883 - hexokinase 3
	CYP39A1 Gene (Entity type)	ENSG00000146233 - cytochrome P450 family 39 subfamily A member 1
	CLTA Gene (Entity type)	ENSG00000122705 - clathrin light chain A

STOML2

Gene (Entity type)

ENSG00000165283 - stomatin like 2

OTC

Gene (Entity type)

ENSG00000036473 - ornithine transcarbamylase

VPS4B

Gene (Entity type)

ENSG00000119541 - vacuolar protein sorting 4 homolog B

RNF38

Gene (Entity type)

ENSG00000137075 - ring finger protein 38

ADAM8

Gene (Entity type)

ENSG00000151651 - ADAM metallopeptidase domain 8

CYP3A4

Gene (Entity type)

ENSG00000160868 - cytochrome P450 family 3 subfamily A member 4

Gene (Entity type)

ENSG00000113600 - complement C9

HK3

Gene (Entity type)

ENSG00000160883 - hexokinase 3

CYP39A1

Gene (Entity type)

ENSG00000146233 - cytochrome P450 family 39 subfamily A member 1

CLTA

Gene (Entity type)

ENSG00000122705 - clathrin light chain A

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.