GSN Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSN Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSN Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSN Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSN Up.

Results found

Linked to

	Label	Description
	CAMK1 Gene (Entity type)	ENSG00000134072 - calcium/calmodulin dependent protein kinase I
	DAP Gene (Entity type)	ENSG00000112977 - death associated protein
	SOX13 Gene (Entity type)	ENSG00000143842 - SRY-box transcription factor 13
	SF3A2 Gene (Entity type)	ENSG00000104897 - splicing factor 3a subunit 2
	TSPAN9 Gene (Entity type)	ENSG00000011105 - tetraspanin 9
	MED24 Gene (Entity type)	ENSG00000008838 - mediator complex subunit 24
	KHSRP Gene (Entity type)	ENSG00000088247 - KH-type splicing regulatory protein
	TNK2 Gene (Entity type)	ENSG00000061938 - tyrosine kinase non receptor 2
	DGCR2 Gene (Entity type)	ENSG00000070413 - DiGeorge syndrome critical region gene 2
	SMG7 Gene (Entity type)	ENSG00000116698 - SMG7 nonsense mediated mRNA decay factor

CAMK1

Gene (Entity type)

ENSG00000134072 - calcium/calmodulin dependent protein kinase I

DAP

Gene (Entity type)

ENSG00000112977 - death associated protein

SOX13

Gene (Entity type)

ENSG00000143842 - SRY-box transcription factor 13

SF3A2

Gene (Entity type)

ENSG00000104897 - splicing factor 3a subunit 2

TSPAN9

Gene (Entity type)

ENSG00000011105 - tetraspanin 9

MED24

Gene (Entity type)

ENSG00000008838 - mediator complex subunit 24

KHSRP

Gene (Entity type)

ENSG00000088247 - KH-type splicing regulatory protein

TNK2

Gene (Entity type)

ENSG00000061938 - tyrosine kinase non receptor 2

DGCR2

Gene (Entity type)

ENSG00000070413 - DiGeorge syndrome critical region gene 2

SMG7

Gene (Entity type)

ENSG00000116698 - SMG7 nonsense mediated mRNA decay factor

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Community

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.