RUBCNL Down (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with RUBCNL Down.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with RUBCNL Down.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with RUBCNL Down.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with RUBCNL Down.

Results found

Linked to

	Label	Description
	CD79B Gene (Entity type)	ENSG00000007312 - CD79b molecule
	CLIP4 Gene (Entity type)	ENSG00000115295 - CAP-Gly domain containing linker protein family member 4
	TMPRSS11E Gene (Entity type)	ENSG00000087128 - transmembrane serine protease 11E
	ESM1 Gene (Entity type)	ENSG00000164283 - endothelial cell specific molecule 1
	APOBEC3A Gene (Entity type)	ENSG00000128383 - apolipoprotein B mRNA editing enzyme catalytic subunit 3A
	MICAL3 Gene (Entity type)	ENSG00000243156 - microtubule associated monooxygenase, calponin and LIM domain containing 3
	ATG5 Gene (Entity type)	ENSG00000057663 - autophagy related 5
	ZNF117 Gene (Entity type)	ENSG00000152926 - zinc finger protein 117
	BCL2L2 Gene (Entity type)	ENSG00000129473 - BCL2 like 2
	UBA6 Gene (Entity type)	ENSG00000033178 - ubiquitin like modifier activating enzyme 6

CD79B

Gene (Entity type)

ENSG00000007312 - CD79b molecule

CLIP4

Gene (Entity type)

ENSG00000115295 - CAP-Gly domain containing linker protein family member 4

TMPRSS11E

Gene (Entity type)

ENSG00000087128 - transmembrane serine protease 11E

ESM1

Gene (Entity type)

ENSG00000164283 - endothelial cell specific molecule 1

APOBEC3A

Gene (Entity type)

ENSG00000128383 - apolipoprotein B mRNA editing enzyme catalytic subunit 3A

MICAL3

Gene (Entity type)

ENSG00000243156 - microtubule associated monooxygenase, calponin and LIM domain containing 3

ATG5

Gene (Entity type)

ENSG00000057663 - autophagy related 5

ZNF117

Gene (Entity type)

ENSG00000152926 - zinc finger protein 117

BCL2L2

Gene (Entity type)

ENSG00000129473 - BCL2 like 2

UBA6

Gene (Entity type)

ENSG00000033178 - ubiquitin like modifier activating enzyme 6

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Community

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.