NME5 Down (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with NME5 Down.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with NME5 Down.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with NME5 Down.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with NME5 Down.

Results found

Linked to

	Label	Description
	TMEM140 Gene (Entity type)	ENSG00000146859 - transmembrane protein 140
	RNF44 Gene (Entity type)	ENSG00000146083 - ring finger protein 44
	GABARAPL2 Gene (Entity type)	ENSG00000034713 - GABA type A receptor associated protein like 2
	PHF1 Gene (Entity type)	ENSG00000112511 - PHD finger protein 1
	APOBEC3A Gene (Entity type)	ENSG00000128383 - apolipoprotein B mRNA editing enzyme catalytic subunit 3A
	C4BPB Gene (Entity type)	ENSG00000123843 - complement component 4 binding protein beta
	IL11RA Gene (Entity type)	ENSG00000137070 - interleukin 11 receptor subunit alpha
	PDPN Gene (Entity type)	ENSG00000162493 - podoplanin
	SNAP29 Gene (Entity type)	ENSG00000099940 - synaptosome associated protein 29
	CCNH Gene (Entity type)	ENSG00000134480 - cyclin H

TMEM140

Gene (Entity type)

ENSG00000146859 - transmembrane protein 140

RNF44

Gene (Entity type)

ENSG00000146083 - ring finger protein 44

GABARAPL2

Gene (Entity type)

ENSG00000034713 - GABA type A receptor associated protein like 2

PHF1

Gene (Entity type)

ENSG00000112511 - PHD finger protein 1

APOBEC3A

Gene (Entity type)

ENSG00000128383 - apolipoprotein B mRNA editing enzyme catalytic subunit 3A

C4BPB

Gene (Entity type)

ENSG00000123843 - complement component 4 binding protein beta

IL11RA

Gene (Entity type)

ENSG00000137070 - interleukin 11 receptor subunit alpha

PDPN

Gene (Entity type)

ENSG00000162493 - podoplanin

SNAP29

Gene (Entity type)

ENSG00000099940 - synaptosome associated protein 29

CCNH

Gene (Entity type)

ENSG00000134480 - cyclin H

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Community

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.