NME2 Down (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with NME2 Down.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with NME2 Down.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with NME2 Down.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with NME2 Down.

Results found

Linked to

	Label	Description
	API5 Gene (Entity type)	ENSG00000166181 - apoptosis inhibitor 5
	TTC28 Gene (Entity type)	ENSG00000100154 - tetratricopeptide repeat domain 28
	GTF2H3 Gene (Entity type)	ENSG00000111358 - general transcription factor IIH subunit 3
	PHC3 Gene (Entity type)	ENSG00000173889 - polyhomeotic homolog 3
	ZNF611 Gene (Entity type)	ENSG00000213020 - zinc finger protein 611
	NUP160 Gene (Entity type)	ENSG00000030066 - nucleoporin 160
	HOXB5 Gene (Entity type)	ENSG00000120075 - homeobox B5
	SVEP1 Gene (Entity type)	ENSG00000165124 - sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1
	FAM20B Gene (Entity type)	ENSG00000116199 - FAM20B glycosaminoglycan xylosylkinase
	DCAF16 Gene (Entity type)	ENSG00000163257 - DDB1 and CUL4 associated factor 16

API5

Gene (Entity type)

ENSG00000166181 - apoptosis inhibitor 5

TTC28

Gene (Entity type)

ENSG00000100154 - tetratricopeptide repeat domain 28

GTF2H3

Gene (Entity type)

ENSG00000111358 - general transcription factor IIH subunit 3

PHC3

Gene (Entity type)

ENSG00000173889 - polyhomeotic homolog 3

ZNF611

Gene (Entity type)

ENSG00000213020 - zinc finger protein 611

NUP160

Gene (Entity type)

ENSG00000030066 - nucleoporin 160

HOXB5

Gene (Entity type)

ENSG00000120075 - homeobox B5

SVEP1

Gene (Entity type)

ENSG00000165124 - sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1

FAM20B

Gene (Entity type)

ENSG00000116199 - FAM20B glycosaminoglycan xylosylkinase

DCAF16

Gene (Entity type)

ENSG00000163257 - DDB1 and CUL4 associated factor 16

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.