GSE238116 EGR1 HCC overexpression MHCC97-H PLC-PRF-5 1 v 2 human up (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE238116_EGR1_HCC overexpression_MHCC97-H_PLC-PRF-5_1_v_2_human_up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE238116_EGR1_HCC overexpression_MHCC97-H_PLC-PRF-5_1_v_2_human_up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE238116_EGR1_HCC overexpression_MHCC97-H_PLC-PRF-5_1_v_2_human_up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE238116_EGR1_HCC overexpression_MHCC97-H_PLC-PRF-5_1_v_2_human_up.

Results found

Linked to

	Label	Description
	HDAC6 Gene (Entity type)	ENSG00000094631 - histone deacetylase 6
	GALE Gene (Entity type)	ENSG00000117308 - UDP-galactose-4-epimerase
	CAMK1 Gene (Entity type)	ENSG00000134072 - calcium/calmodulin dependent protein kinase I
	CAT Gene (Entity type)	ENSG00000121691 - catalase
	RBCK1 Gene (Entity type)	ENSG00000125826 - RANBP2-type and C3HC4-type zinc finger containing 1
	UBTF Gene (Entity type)	ENSG00000108312 - upstream binding transcription factor
	IDH3B Gene (Entity type)	ENSG00000101365 - isocitrate dehydrogenase (NAD(+)) 3 non-catalytic subunit beta
	TNFRSF14 Gene (Entity type)	ENSG00000157873 - TNF receptor superfamily member 14
	CD68 Gene (Entity type)	ENSG00000129226 - CD68 molecule
	PKMYT1 Gene (Entity type)	ENSG00000127564 - protein kinase, membrane associated tyrosine/threonine 1

HDAC6

Gene (Entity type)

ENSG00000094631 - histone deacetylase 6

GALE

Gene (Entity type)

ENSG00000117308 - UDP-galactose-4-epimerase

CAMK1

Gene (Entity type)

ENSG00000134072 - calcium/calmodulin dependent protein kinase I

CAT

Gene (Entity type)

ENSG00000121691 - catalase

RBCK1

Gene (Entity type)

ENSG00000125826 - RANBP2-type and C3HC4-type zinc finger containing 1

UBTF

Gene (Entity type)

ENSG00000108312 - upstream binding transcription factor

IDH3B

Gene (Entity type)

ENSG00000101365 - isocitrate dehydrogenase (NAD(+)) 3 non-catalytic subunit beta

TNFRSF14

Gene (Entity type)

ENSG00000157873 - TNF receptor superfamily member 14

CD68

Gene (Entity type)

ENSG00000129226 - CD68 molecule

PKMYT1

Gene (Entity type)

ENSG00000127564 - protein kinase, membrane associated tyrosine/threonine 1

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.