PYGM Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with PYGM Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with PYGM Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with PYGM Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with PYGM Up.

Results found

Linked to

	Label	Description
	ZNF706 Gene (Entity type)	ENSG00000120963 - zinc finger protein 706
	DDA1 Gene (Entity type)	ENSG00000130311 - DET1 and DDB1 associated 1
	PLXDC1 Gene (Entity type)	ENSG00000161381 - plexin domain containing 1
	RBM5 Gene (Entity type)	ENSG00000003756 - RNA binding motif protein 5
	TPP2 Gene (Entity type)	ENSG00000134900 - tripeptidyl peptidase 2
	UPK3B Gene (Entity type)	ENSG00000243566 - uroplakin 3B

ZNF706

Gene (Entity type)

ENSG00000120963 - zinc finger protein 706

DDA1

Gene (Entity type)

ENSG00000130311 - DET1 and DDB1 associated 1

PLXDC1

Gene (Entity type)

ENSG00000161381 - plexin domain containing 1

RBM5

Gene (Entity type)

ENSG00000003756 - RNA binding motif protein 5

TPP2

Gene (Entity type)

ENSG00000134900 - tripeptidyl peptidase 2

UPK3B

Gene (Entity type)

ENSG00000243566 - uroplakin 3B

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CFDE Workbench

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Community

Resources

@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.