KDM5C Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with KDM5C Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with KDM5C Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with KDM5C Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with KDM5C Up.

Results found

Linked to

	Label	Description
	PFDN2 Gene (Entity type)	ENSG00000143256 - prefoldin subunit 2
	PSMD4 Gene (Entity type)	ENSG00000159352 - proteasome 26S subunit ubiquitin receptor, non-ATPase 4
	PHIP Gene (Entity type)	ENSG00000146247 - PHIP subunit of CUL4-Ring ligase complex
	TIMM17A Gene (Entity type)	ENSG00000134375 - translocase of inner mitochondrial membrane 17A
	USP25 Gene (Entity type)	ENSG00000155313 - ubiquitin specific peptidase 25
	ABHD11 Gene (Entity type)	ENSG00000106077 - abhydrolase domain containing 11
	SMURF1 Gene (Entity type)	ENSG00000198742 - SMAD specific E3 ubiquitin protein ligase 1
	ARC Gene (Entity type)	ENSG00000198576 - activity regulated cytoskeleton associated protein
	VPREB1 Gene (Entity type)	ENSG00000169575 - V-set pre-B cell surrogate light chain 1
	MPHOSPH6 Gene (Entity type)	ENSG00000135698 - M-phase phosphoprotein 6

PFDN2

Gene (Entity type)

ENSG00000143256 - prefoldin subunit 2

PSMD4

Gene (Entity type)

ENSG00000159352 - proteasome 26S subunit ubiquitin receptor, non-ATPase 4

PHIP

Gene (Entity type)

ENSG00000146247 - PHIP subunit of CUL4-Ring ligase complex

TIMM17A

Gene (Entity type)

ENSG00000134375 - translocase of inner mitochondrial membrane 17A

USP25

Gene (Entity type)

ENSG00000155313 - ubiquitin specific peptidase 25

ABHD11

Gene (Entity type)

ENSG00000106077 - abhydrolase domain containing 11

SMURF1

Gene (Entity type)

ENSG00000198742 - SMAD specific E3 ubiquitin protein ligase 1

ARC

Gene (Entity type)

ENSG00000198576 - activity regulated cytoskeleton associated protein

VPREB1

Gene (Entity type)

ENSG00000169575 - V-set pre-B cell surrogate light chain 1

MPHOSPH6

Gene (Entity type)

ENSG00000135698 - M-phase phosphoprotein 6

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CFDE Workbench

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Community

Resources

@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.