KDM5C Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with KDM5C Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with KDM5C Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with KDM5C Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with KDM5C Up.

Results found

Linked to

	Label	Description
	NFYA Gene (Entity type)	ENSG00000001167 - nuclear transcription factor Y subunit alpha
	SH3GL3 Gene (Entity type)	ENSG00000140600 - SH3 domain containing GRB2 like 3, endophilin A3
	PFDN2 Gene (Entity type)	ENSG00000143256 - prefoldin subunit 2
	SMURF1 Gene (Entity type)	ENSG00000198742 - SMAD specific E3 ubiquitin protein ligase 1
	PHIP Gene (Entity type)	ENSG00000146247 - PHIP subunit of CUL4-Ring ligase complex
	ATP2C2 Gene (Entity type)	ENSG00000064270 - ATPase secretory pathway Ca2+ transporting 2
	JAKMIP2 Gene (Entity type)	ENSG00000176049 - janus kinase and microtubule interacting protein 2
	MT3 Gene (Entity type)	ENSG00000087250 - metallothionein 3
	USP25 Gene (Entity type)	ENSG00000155313 - ubiquitin specific peptidase 25
	PPM1E Gene (Entity type)	ENSG00000175175 - protein phosphatase, Mg2+/Mn2+ dependent 1E

NFYA

Gene (Entity type)

ENSG00000001167 - nuclear transcription factor Y subunit alpha

SH3GL3

Gene (Entity type)

ENSG00000140600 - SH3 domain containing GRB2 like 3, endophilin A3

PFDN2

Gene (Entity type)

ENSG00000143256 - prefoldin subunit 2

SMURF1

Gene (Entity type)

ENSG00000198742 - SMAD specific E3 ubiquitin protein ligase 1

PHIP

Gene (Entity type)

ENSG00000146247 - PHIP subunit of CUL4-Ring ligase complex

ATP2C2

Gene (Entity type)

ENSG00000064270 - ATPase secretory pathway Ca2+ transporting 2

JAKMIP2

Gene (Entity type)

ENSG00000176049 - janus kinase and microtubule interacting protein 2

MT3

Gene (Entity type)

ENSG00000087250 - metallothionein 3

USP25

Gene (Entity type)

ENSG00000155313 - ubiquitin specific peptidase 25

PPM1E

Gene (Entity type)

ENSG00000175175 - protein phosphatase, Mg2+/Mn2+ dependent 1E

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Consortium

Community

Resources

@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.