MAG Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with MAG Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with MAG Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with MAG Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with MAG Up.

Results found

Linked to

	Label	Description
	NRXN3 Gene (Entity type)	ENSG00000021645 - neurexin 3
	PRB3 Gene (Entity type)	ENSG00000197870 - proline rich protein BstNI subfamily 3
	MDH2 Gene (Entity type)	ENSG00000146701 - malate dehydrogenase 2
	OSBPL2 Gene (Entity type)	ENSG00000130703 - oxysterol binding protein like 2
	RUFY2 Gene (Entity type)	ENSG00000204130 - RUN and FYVE domain containing 2
	CHRNA9 Gene (Entity type)	ENSG00000174343 - cholinergic receptor nicotinic alpha 9 subunit
	UBAP2 Gene (Entity type)	ENSG00000137073 - ubiquitin associated protein 2
	NADSYN1 Gene (Entity type)	ENSG00000172890 - NAD synthetase 1
	CHPF2 Gene (Entity type)	ENSG00000033100 - chondroitin polymerizing factor 2
	ARPC1A Gene (Entity type)	ENSG00000241685 - actin related protein 2/3 complex subunit 1A

NRXN3

Gene (Entity type)

ENSG00000021645 - neurexin 3

PRB3

Gene (Entity type)

ENSG00000197870 - proline rich protein BstNI subfamily 3

MDH2

Gene (Entity type)

ENSG00000146701 - malate dehydrogenase 2

OSBPL2

Gene (Entity type)

ENSG00000130703 - oxysterol binding protein like 2

RUFY2

Gene (Entity type)

ENSG00000204130 - RUN and FYVE domain containing 2

CHRNA9

Gene (Entity type)

ENSG00000174343 - cholinergic receptor nicotinic alpha 9 subunit

UBAP2

Gene (Entity type)

ENSG00000137073 - ubiquitin associated protein 2

NADSYN1

Gene (Entity type)

ENSG00000172890 - NAD synthetase 1

CHPF2

Gene (Entity type)

ENSG00000033100 - chondroitin polymerizing factor 2

ARPC1A

Gene (Entity type)

ENSG00000241685 - actin related protein 2/3 complex subunit 1A

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Community

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.