REPS2 Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with REPS2 Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with REPS2 Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with REPS2 Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with REPS2 Up.

Results found

Linked to

	Label	Description
	USP9X Gene (Entity type)	ENSG00000124486 - ubiquitin specific peptidase 9 X-linked
	TMPRSS11E Gene (Entity type)	ENSG00000087128 - transmembrane serine protease 11E
	APOBEC3A Gene (Entity type)	ENSG00000128383 - apolipoprotein B mRNA editing enzyme catalytic subunit 3A
	STN1 Gene (Entity type)	ENSG00000107960 - STN1 subunit of CST complex
	VWA8 Gene (Entity type)	ENSG00000102763 - von Willebrand factor A domain containing 8
	SUCLA2 Gene (Entity type)	ENSG00000136143 - succinate-CoA ligase ADP-forming subunit beta
	PIK3C2A Gene (Entity type)	ENSG00000011405 - phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 alpha
	NOD2 Gene (Entity type)	ENSG00000167207 - nucleotide binding oligomerization domain containing 2
	CD1B Gene (Entity type)	ENSG00000158485 - CD1b molecule
	BECN1 Gene (Entity type)	ENSG00000126581 - beclin 1

USP9X

Gene (Entity type)

ENSG00000124486 - ubiquitin specific peptidase 9 X-linked

TMPRSS11E

Gene (Entity type)

ENSG00000087128 - transmembrane serine protease 11E

APOBEC3A

Gene (Entity type)

ENSG00000128383 - apolipoprotein B mRNA editing enzyme catalytic subunit 3A

STN1

Gene (Entity type)

ENSG00000107960 - STN1 subunit of CST complex

VWA8

Gene (Entity type)

ENSG00000102763 - von Willebrand factor A domain containing 8

SUCLA2

Gene (Entity type)

ENSG00000136143 - succinate-CoA ligase ADP-forming subunit beta

PIK3C2A

Gene (Entity type)

ENSG00000011405 - phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 alpha

NOD2

Gene (Entity type)

ENSG00000167207 - nucleotide binding oligomerization domain containing 2

CD1B

Gene (Entity type)

ENSG00000158485 - CD1b molecule

BECN1

Gene (Entity type)

ENSG00000126581 - beclin 1

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CFDE Workbench

Consortium

Community

Resources

@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.