CA10 Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with CA10 Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with CA10 Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with CA10 Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with CA10 Up.

Results found

Linked to

	Label	Description
	ME3 Gene (Entity type)	ENSG00000151376 - malic enzyme 3
	IGSF6 Gene (Entity type)	ENSG00000140749 - immunoglobulin superfamily member 6
	RNF38 Gene (Entity type)	ENSG00000137075 - ring finger protein 38
	TM6SF1 Gene (Entity type)	ENSG00000136404 - transmembrane 6 superfamily member 1
	APCS Gene (Entity type)	ENSG00000132703 - amyloid P component, serum
	SLC2A2 Gene (Entity type)	ENSG00000163581 - solute carrier family 2 member 2
	KLHL2 Gene (Entity type)	ENSG00000109466 - kelch like family member 2
	KMT5A Gene (Entity type)	ENSG00000183955 - lysine methyltransferase 5A
	SMAD2 Gene (Entity type)	ENSG00000175387 - SMAD family member 2
	WBP4 Gene (Entity type)	ENSG00000120688 - WW domain binding protein 4

ME3

Gene (Entity type)

ENSG00000151376 - malic enzyme 3

IGSF6

Gene (Entity type)

ENSG00000140749 - immunoglobulin superfamily member 6

RNF38

Gene (Entity type)

ENSG00000137075 - ring finger protein 38

TM6SF1

Gene (Entity type)

ENSG00000136404 - transmembrane 6 superfamily member 1

APCS

Gene (Entity type)

ENSG00000132703 - amyloid P component, serum

SLC2A2

Gene (Entity type)

ENSG00000163581 - solute carrier family 2 member 2

KLHL2

Gene (Entity type)

ENSG00000109466 - kelch like family member 2

KMT5A

Gene (Entity type)

ENSG00000183955 - lysine methyltransferase 5A

SMAD2

Gene (Entity type)

ENSG00000175387 - SMAD family member 2

WBP4

Gene (Entity type)

ENSG00000120688 - WW domain binding protein 4

DISPLAY PER PAGE

CFDE Workbench

Consortium

Community

Resources

@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.