GPHN Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GPHN Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GPHN Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GPHN Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GPHN Up.

Results found

Linked to

	Label	Description
	ABCA12 Gene (Entity type)	ENSG00000144452 - ATP binding cassette subfamily A member 12
	ATP8B4 Gene (Entity type)	ENSG00000104043 - ATPase phospholipid transporting 8B4 (putative)
	CASQ2 Gene (Entity type)	ENSG00000118729 - calsequestrin 2
	TNNT2 Gene (Entity type)	ENSG00000118194 - troponin T2, cardiac type
	DPP8 Gene (Entity type)	ENSG00000074603 - dipeptidyl peptidase 8
	MYH8 Gene (Entity type)	ENSG00000133020 - myosin heavy chain 8
	RAB5A Gene (Entity type)	ENSG00000144566 - RAB5A, member RAS oncogene family
	UQCRQ Gene (Entity type)	ENSG00000164405 - ubiquinol-cytochrome c reductase complex III subunit VII
	RNFT1 Gene (Entity type)	ENSG00000189050 - ring finger protein, transmembrane 1
	HINT1 Gene (Entity type)	ENSG00000169567 - histidine triad nucleotide binding protein 1

ABCA12

Gene (Entity type)

ENSG00000144452 - ATP binding cassette subfamily A member 12

ATP8B4

Gene (Entity type)

ENSG00000104043 - ATPase phospholipid transporting 8B4 (putative)

CASQ2

Gene (Entity type)

ENSG00000118729 - calsequestrin 2

TNNT2

Gene (Entity type)

ENSG00000118194 - troponin T2, cardiac type

DPP8

Gene (Entity type)

ENSG00000074603 - dipeptidyl peptidase 8

MYH8

Gene (Entity type)

ENSG00000133020 - myosin heavy chain 8

RAB5A

Gene (Entity type)

ENSG00000144566 - RAB5A, member RAS oncogene family

UQCRQ

Gene (Entity type)

ENSG00000164405 - ubiquinol-cytochrome c reductase complex III subunit VII

RNFT1

Gene (Entity type)

ENSG00000189050 - ring finger protein, transmembrane 1

HINT1

Gene (Entity type)

ENSG00000169567 - histidine triad nucleotide binding protein 1

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CFDE Workbench

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Community

Resources

@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.