GPHN Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GPHN Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GPHN Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GPHN Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GPHN Up.

Results found

Linked to

	Label	Description
	KDM5A Gene (Entity type)	ENSG00000073614 - lysine demethylase 5A
	HLA-DMA Gene (Entity type)	ENSG00000204257 - major histocompatibility complex, class II, DM alpha
	HINT1 Gene (Entity type)	ENSG00000169567 - histidine triad nucleotide binding protein 1
	ATP8B4 Gene (Entity type)	ENSG00000104043 - ATPase phospholipid transporting 8B4 (putative)
	EMC3 Gene (Entity type)	ENSG00000125037 - ER membrane protein complex subunit 3
	DPP8 Gene (Entity type)	ENSG00000074603 - dipeptidyl peptidase 8
	UQCRQ Gene (Entity type)	ENSG00000164405 - ubiquinol-cytochrome c reductase complex III subunit VII
	RNF114 Gene (Entity type)	ENSG00000124226 - ring finger protein 114
	DEFB4A Gene (Entity type)	ENSG00000171711 - defensin beta 4A
	MYOZ2 Gene (Entity type)	ENSG00000172399 - myozenin 2

KDM5A

Gene (Entity type)

ENSG00000073614 - lysine demethylase 5A

HLA-DMA

Gene (Entity type)

ENSG00000204257 - major histocompatibility complex, class II, DM alpha

HINT1

Gene (Entity type)

ENSG00000169567 - histidine triad nucleotide binding protein 1

ATP8B4

Gene (Entity type)

ENSG00000104043 - ATPase phospholipid transporting 8B4 (putative)

EMC3

Gene (Entity type)

ENSG00000125037 - ER membrane protein complex subunit 3

DPP8

Gene (Entity type)

ENSG00000074603 - dipeptidyl peptidase 8

UQCRQ

Gene (Entity type)

ENSG00000164405 - ubiquinol-cytochrome c reductase complex III subunit VII

RNF114

Gene (Entity type)

ENSG00000124226 - ring finger protein 114

DEFB4A

Gene (Entity type)

ENSG00000171711 - defensin beta 4A

MYOZ2

Gene (Entity type)

ENSG00000172399 - myozenin 2

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Community

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.