ALPK3 Down (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with ALPK3 Down.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with ALPK3 Down.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with ALPK3 Down.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with ALPK3 Down.

Results found

Linked to

	Label	Description
	SMC3 Gene (Entity type)	ENSG00000108055 - structural maintenance of chromosomes 3
	PIGB Gene (Entity type)	ENSG00000069943 - phosphatidylinositol glycan anchor biosynthesis class B
	IGSF1 Gene (Entity type)	ENSG00000147255 - immunoglobulin superfamily member 1
	PYROXD1 Gene (Entity type)	ENSG00000121350 - pyridine nucleotide-disulphide oxidoreductase domain 1
	ARAP3 Gene (Entity type)	ENSG00000120318 - ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3
	SERPINA6 Gene (Entity type)	ENSG00000170099 - serpin family A member 6
	CRTC3 Gene (Entity type)	ENSG00000140577 - CREB regulated transcription coactivator 3
	CHRM3 Gene (Entity type)	ENSG00000133019 - cholinergic receptor muscarinic 3
	TNKS Gene (Entity type)	ENSG00000173273 - tankyrase
	CTNND2 Gene (Entity type)	ENSG00000169862 - catenin delta 2

SMC3

Gene (Entity type)

ENSG00000108055 - structural maintenance of chromosomes 3

PIGB

Gene (Entity type)

ENSG00000069943 - phosphatidylinositol glycan anchor biosynthesis class B

IGSF1

Gene (Entity type)

ENSG00000147255 - immunoglobulin superfamily member 1

PYROXD1

Gene (Entity type)

ENSG00000121350 - pyridine nucleotide-disulphide oxidoreductase domain 1

ARAP3

Gene (Entity type)

ENSG00000120318 - ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3

SERPINA6

Gene (Entity type)

ENSG00000170099 - serpin family A member 6

CRTC3

Gene (Entity type)

ENSG00000140577 - CREB regulated transcription coactivator 3

CHRM3

Gene (Entity type)

ENSG00000133019 - cholinergic receptor muscarinic 3

TNKS

Gene (Entity type)

ENSG00000173273 - tankyrase

CTNND2

Gene (Entity type)

ENSG00000169862 - catenin delta 2

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CFDE Workbench

Consortium

Community

Resources

@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.