CALY Down (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with CALY Down.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with CALY Down.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with CALY Down.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with CALY Down.

Results found

Linked to

	Label	Description
	B4GALT4 Gene (Entity type)	ENSG00000121578 - beta-1,4-galactosyltransferase 4
	MLC1 Gene (Entity type)	ENSG00000100427 - modulator of VRAC current 1
	CSPG5 Gene (Entity type)	ENSG00000114646 - chondroitin sulfate proteoglycan 5
	UBXN7 Gene (Entity type)	ENSG00000163960 - UBX domain protein 7
	ARHGEF9 Gene (Entity type)	ENSG00000131089 - Cdc42 guanine nucleotide exchange factor 9
	ACYP2 Gene (Entity type)	ENSG00000170634 - acylphosphatase 2
	GPHN Gene (Entity type)	ENSG00000171723 - gephyrin
	KLHDC8A Gene (Entity type)	ENSG00000162873 - kelch domain containing 8A
	MT3 Gene (Entity type)	ENSG00000087250 - metallothionein 3
	SLC35A5 Gene (Entity type)	ENSG00000138459 - solute carrier family 35 member A5

B4GALT4

Gene (Entity type)

ENSG00000121578 - beta-1,4-galactosyltransferase 4

MLC1

Gene (Entity type)

ENSG00000100427 - modulator of VRAC current 1

CSPG5

Gene (Entity type)

ENSG00000114646 - chondroitin sulfate proteoglycan 5

UBXN7

Gene (Entity type)

ENSG00000163960 - UBX domain protein 7

ARHGEF9

Gene (Entity type)

ENSG00000131089 - Cdc42 guanine nucleotide exchange factor 9

ACYP2

Gene (Entity type)

ENSG00000170634 - acylphosphatase 2

GPHN

Gene (Entity type)

ENSG00000171723 - gephyrin

KLHDC8A

Gene (Entity type)

ENSG00000162873 - kelch domain containing 8A

MT3

Gene (Entity type)

ENSG00000087250 - metallothionein 3

SLC35A5

Gene (Entity type)

ENSG00000138459 - solute carrier family 35 member A5

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.