GSE139540 menadione 3 v 1 human dn (Gene Set)

Dcc Asset:

rummageo chemical perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE139540_menadione_3_v_1_human_dn.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE139540_menadione_3_v_1_human_dn.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE139540_menadione_3_v_1_human_dn.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE139540_menadione_3_v_1_human_dn.

Results found

Linked to

	Label	Description
	SOX21-AS1 Gene (Entity type)	SOX21 antisense RNA 1
	FTH1P2 Gene (Entity type)	ferritin heavy chain 1 pseudogene 2
	LOC286177 Gene (Entity type)	uncharacterized LOC286177
	RPS24P5 Gene (Entity type)	ribosomal protein S24 pseudogene 5
	SCUBE1-AS1 Gene (Entity type)	SCUBE1 antisense RNA 1
	MTCO1P14 Gene (Entity type)	MT-CO1 pseudogene 14
	BEST4 Gene (Entity type)	bestrophin 4
	JAZF1 Gene (Entity type)	JAZF zinc finger 1
	RABGEF1 Gene (Entity type)	RAB guanine nucleotide exchange factor 1
	NRDC Gene (Entity type)	nardilysin convertase

SOX21-AS1

Gene (Entity type)

SOX21 antisense RNA 1

FTH1P2

Gene (Entity type)

ferritin heavy chain 1 pseudogene 2

LOC286177

Gene (Entity type)

uncharacterized LOC286177

RPS24P5

Gene (Entity type)

ribosomal protein S24 pseudogene 5

SCUBE1-AS1

Gene (Entity type)

SCUBE1 antisense RNA 1

MTCO1P14

Gene (Entity type)

MT-CO1 pseudogene 14

BEST4

Gene (Entity type)

bestrophin 4

JAZF1

Gene (Entity type)

JAZF zinc finger 1

RABGEF1

Gene (Entity type)

RAB guanine nucleotide exchange factor 1

NRDC

Gene (Entity type)

nardilysin convertase

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.