MARK3 Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with MARK3 Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with MARK3 Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with MARK3 Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with MARK3 Up.

Results found

Linked to

	Label	Description
	PIGB Gene (Entity type)	ENSG00000069943 - phosphatidylinositol glycan anchor biosynthesis class B
	RECQL Gene (Entity type)	ENSG00000004700 - RecQ like helicase
	FLI1 Gene (Entity type)	ENSG00000151702 - Fli-1 proto-oncogene, ETS transcription factor
	KCTD20 Gene (Entity type)	ENSG00000112078 - potassium channel tetramerization domain containing 20
	NOP2 Gene (Entity type)	ENSG00000111641 - NOP2 nucleolar protein
	USP14 Gene (Entity type)	ENSG00000101557 - ubiquitin specific peptidase 14
	AP3D1 Gene (Entity type)	ENSG00000065000 - adaptor related protein complex 3 subunit delta 1
	FADD Gene (Entity type)	ENSG00000168040 - Fas associated via death domain
	TMEM214 Gene (Entity type)	ENSG00000119777 - transmembrane protein 214
	ITGB7 Gene (Entity type)	ENSG00000139626 - integrin subunit beta 7

PIGB

Gene (Entity type)

ENSG00000069943 - phosphatidylinositol glycan anchor biosynthesis class B

RECQL

Gene (Entity type)

ENSG00000004700 - RecQ like helicase

FLI1

Gene (Entity type)

ENSG00000151702 - Fli-1 proto-oncogene, ETS transcription factor

KCTD20

Gene (Entity type)

ENSG00000112078 - potassium channel tetramerization domain containing 20

NOP2

Gene (Entity type)

ENSG00000111641 - NOP2 nucleolar protein

USP14

Gene (Entity type)

ENSG00000101557 - ubiquitin specific peptidase 14

AP3D1

Gene (Entity type)

ENSG00000065000 - adaptor related protein complex 3 subunit delta 1

FADD

Gene (Entity type)

ENSG00000168040 - Fas associated via death domain

TMEM214

Gene (Entity type)

ENSG00000119777 - transmembrane protein 214

ITGB7

Gene (Entity type)

ENSG00000139626 - integrin subunit beta 7

DISPLAY PER PAGE

CFDE Workbench

Consortium

Community

Resources

@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.