GPT Down (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GPT Down.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GPT Down.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GPT Down.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GPT Down.

Results found

Linked to

	Label	Description
	GPSM3 Gene (Entity type)	ENSG00000213654 - G protein signaling modulator 3
	CEP68 Gene (Entity type)	ENSG00000011523 - centrosomal protein 68
	SNRK Gene (Entity type)	ENSG00000163788 - SNF related kinase
	DBT Gene (Entity type)	ENSG00000137992 - dihydrolipoamide branched chain transacylase E2
	ATP6V0A4 Gene (Entity type)	ENSG00000105929 - ATPase H+ transporting V0 subunit a4
	MRPL42 Gene (Entity type)	ENSG00000198015 - mitochondrial ribosomal protein L42
	OSBPL11 Gene (Entity type)	ENSG00000144909 - oxysterol binding protein like 11
	PIP5K1A Gene (Entity type)	ENSG00000143398 - phosphatidylinositol-4-phosphate 5-kinase type 1 alpha
	GLUD2 Gene (Entity type)	ENSG00000182890 - glutamate dehydrogenase 2
	UBXN7 Gene (Entity type)	ENSG00000163960 - UBX domain protein 7

GPSM3

Gene (Entity type)

ENSG00000213654 - G protein signaling modulator 3

CEP68

Gene (Entity type)

ENSG00000011523 - centrosomal protein 68

SNRK

Gene (Entity type)

ENSG00000163788 - SNF related kinase

DBT

Gene (Entity type)

ENSG00000137992 - dihydrolipoamide branched chain transacylase E2

ATP6V0A4

Gene (Entity type)

ENSG00000105929 - ATPase H+ transporting V0 subunit a4

MRPL42

Gene (Entity type)

ENSG00000198015 - mitochondrial ribosomal protein L42

OSBPL11

Gene (Entity type)

ENSG00000144909 - oxysterol binding protein like 11

PIP5K1A

Gene (Entity type)

ENSG00000143398 - phosphatidylinositol-4-phosphate 5-kinase type 1 alpha

GLUD2

Gene (Entity type)

ENSG00000182890 - glutamate dehydrogenase 2

UBXN7

Gene (Entity type)

ENSG00000163960 - UBX domain protein 7

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Community

Resources

@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.