GPT Down (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GPT Down.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GPT Down.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GPT Down.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GPT Down.

Results found

Linked to

	Label	Description
	SDHD Gene (Entity type)	ENSG00000204370 - succinate dehydrogenase complex subunit D
	PIP5K1A Gene (Entity type)	ENSG00000143398 - phosphatidylinositol-4-phosphate 5-kinase type 1 alpha
	OGFOD1 Gene (Entity type)	ENSG00000087263 - 2-oxoglutarate and iron dependent oxygenase domain containing 1
	TDP1 Gene (Entity type)	ENSG00000042088 - tyrosyl-DNA phosphodiesterase 1
	SNRK Gene (Entity type)	ENSG00000163788 - SNF related kinase
	DCAF10 Gene (Entity type)	ENSG00000122741 - DDB1 and CUL4 associated factor 10
	CHD1 Gene (Entity type)	ENSG00000153922 - chromodomain helicase DNA binding protein 1
	UBXN7 Gene (Entity type)	ENSG00000163960 - UBX domain protein 7
	HOXB9 Gene (Entity type)	ENSG00000170689 - homeobox B9
	HYAL1 Gene (Entity type)	ENSG00000114378 - hyaluronidase 1

SDHD

Gene (Entity type)

ENSG00000204370 - succinate dehydrogenase complex subunit D

PIP5K1A

Gene (Entity type)

ENSG00000143398 - phosphatidylinositol-4-phosphate 5-kinase type 1 alpha

OGFOD1

Gene (Entity type)

ENSG00000087263 - 2-oxoglutarate and iron dependent oxygenase domain containing 1

TDP1

Gene (Entity type)

ENSG00000042088 - tyrosyl-DNA phosphodiesterase 1

SNRK

Gene (Entity type)

ENSG00000163788 - SNF related kinase

DCAF10

Gene (Entity type)

ENSG00000122741 - DDB1 and CUL4 associated factor 10

CHD1

Gene (Entity type)

ENSG00000153922 - chromodomain helicase DNA binding protein 1

UBXN7

Gene (Entity type)

ENSG00000163960 - UBX domain protein 7

HOXB9

Gene (Entity type)

ENSG00000170689 - homeobox B9

HYAL1

Gene (Entity type)

ENSG00000114378 - hyaluronidase 1

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CFDE Workbench

Consortium

Community

Resources

@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.