GSE139540 4 V 1 MENADIONE HUMAN DN (Gene Set)

Dcc Asset:

RummaGEO DrugPerturbations 2025.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE139540 4 V 1 MENADIONE HUMAN DN.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE139540 4 V 1 MENADIONE HUMAN DN.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE139540 4 V 1 MENADIONE HUMAN DN.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE139540 4 V 1 MENADIONE HUMAN DN.

Results found

Linked to

	Label	Description
	HDAC5 Gene (Entity type)	ENSG00000108840 - histone deacetylase 5
	IL11 Gene (Entity type)	ENSG00000095752 - interleukin 11
	UBTF Gene (Entity type)	ENSG00000108312 - upstream binding transcription factor
	TDG Gene (Entity type)	ENSG00000139372 - thymine DNA glycosylase
	NRBF2 Gene (Entity type)	ENSG00000148572 - nuclear receptor binding factor 2
	TMEM41B Gene (Entity type)	ENSG00000166471 - transmembrane protein 41B
	EWSR1 Gene (Entity type)	ENSG00000182944 - EWS RNA binding protein 1
	VWA1 Gene (Entity type)	ENSG00000179403 - von Willebrand factor A domain containing 1
	UBAP2 Gene (Entity type)	ENSG00000137073 - ubiquitin associated protein 2
	BCL2L13 Gene (Entity type)	ENSG00000099968 - BCL2 like 13

HDAC5

Gene (Entity type)

ENSG00000108840 - histone deacetylase 5

IL11

Gene (Entity type)

ENSG00000095752 - interleukin 11

UBTF

Gene (Entity type)

ENSG00000108312 - upstream binding transcription factor

TDG

Gene (Entity type)

ENSG00000139372 - thymine DNA glycosylase

NRBF2

Gene (Entity type)

ENSG00000148572 - nuclear receptor binding factor 2

TMEM41B

Gene (Entity type)

ENSG00000166471 - transmembrane protein 41B

EWSR1

Gene (Entity type)

ENSG00000182944 - EWS RNA binding protein 1

VWA1

Gene (Entity type)

ENSG00000179403 - von Willebrand factor A domain containing 1

UBAP2

Gene (Entity type)

ENSG00000137073 - ubiquitin associated protein 2

BCL2L13

Gene (Entity type)

ENSG00000099968 - BCL2 like 13

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.