MEST Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with MEST Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with MEST Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with MEST Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with MEST Up.

Results found

Linked to

	Label	Description
	CCNC Gene (Entity type)	ENSG00000112237 - cyclin C
	LPCAT4 Gene (Entity type)	ENSG00000176454 - lysophosphatidylcholine acyltransferase 4
	SLC35E3 Gene (Entity type)	ENSG00000175782 - solute carrier family 35 member E3
	SMCHD1 Gene (Entity type)	ENSG00000101596 - structural maintenance of chromosomes flexible hinge domain containing 1
	ARFGEF1 Gene (Entity type)	ENSG00000066777 - ARF guanine nucleotide exchange factor 1
	KYAT3 Gene (Entity type)	ENSG00000137944 - kynurenine aminotransferase 3
	HYAL1 Gene (Entity type)	ENSG00000114378 - hyaluronidase 1
	TWF2 Gene (Entity type)	ENSG00000247596 - twinfilin actin binding protein 2
	SP140L Gene (Entity type)	ENSG00000185404 - SP140 like nuclear body protein
	AXIN1 Gene (Entity type)	ENSG00000103126 - axin 1

CCNC

Gene (Entity type)

ENSG00000112237 - cyclin C

LPCAT4

Gene (Entity type)

ENSG00000176454 - lysophosphatidylcholine acyltransferase 4

SLC35E3

Gene (Entity type)

ENSG00000175782 - solute carrier family 35 member E3

SMCHD1

Gene (Entity type)

ENSG00000101596 - structural maintenance of chromosomes flexible hinge domain containing 1

ARFGEF1

Gene (Entity type)

ENSG00000066777 - ARF guanine nucleotide exchange factor 1

KYAT3

Gene (Entity type)

ENSG00000137944 - kynurenine aminotransferase 3

HYAL1

Gene (Entity type)

ENSG00000114378 - hyaluronidase 1

TWF2

Gene (Entity type)

ENSG00000247596 - twinfilin actin binding protein 2

SP140L

Gene (Entity type)

ENSG00000185404 - SP140 like nuclear body protein

AXIN1

Gene (Entity type)

ENSG00000103126 - axin 1

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Community

Resources

@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.