EREG Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with EREG Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with EREG Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with EREG Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with EREG Up.

Results found

Linked to

	Label	Description
	PPP2CB Gene (Entity type)	ENSG00000104695 - protein phosphatase 2 catalytic subunit beta
	PHIP Gene (Entity type)	ENSG00000146247 - PHIP subunit of CUL4-Ring ligase complex
	STX16 Gene (Entity type)	ENSG00000124222 - syntaxin 16
	AP3D1 Gene (Entity type)	ENSG00000065000 - adaptor related protein complex 3 subunit delta 1
	POGK Gene (Entity type)	ENSG00000143157 - pogo transposable element derived with KRAB domain
	SRSF4 Gene (Entity type)	ENSG00000116350 - serine and arginine rich splicing factor 4
	MGRN1 Gene (Entity type)	ENSG00000102858 - mahogunin ring finger 1
	RNF38 Gene (Entity type)	ENSG00000137075 - ring finger protein 38
	HOXB5 Gene (Entity type)	ENSG00000120075 - homeobox B5
	RANBP2 Gene (Entity type)	ENSG00000153201 - RAN binding protein 2

PPP2CB

Gene (Entity type)

ENSG00000104695 - protein phosphatase 2 catalytic subunit beta

PHIP

Gene (Entity type)

ENSG00000146247 - PHIP subunit of CUL4-Ring ligase complex

STX16

Gene (Entity type)

ENSG00000124222 - syntaxin 16

AP3D1

Gene (Entity type)

ENSG00000065000 - adaptor related protein complex 3 subunit delta 1

POGK

Gene (Entity type)

ENSG00000143157 - pogo transposable element derived with KRAB domain

SRSF4

Gene (Entity type)

ENSG00000116350 - serine and arginine rich splicing factor 4

MGRN1

Gene (Entity type)

ENSG00000102858 - mahogunin ring finger 1

RNF38

Gene (Entity type)

ENSG00000137075 - ring finger protein 38

HOXB5

Gene (Entity type)

ENSG00000120075 - homeobox B5

RANBP2

Gene (Entity type)

ENSG00000153201 - RAN binding protein 2

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.