SEMA4G Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with SEMA4G Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with SEMA4G Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with SEMA4G Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with SEMA4G Up.

Results found

Linked to

	Label	Description
	HPGDS Gene (Entity type)	ENSG00000163106 - hematopoietic prostaglandin D synthase
	CHIT1 Gene (Entity type)	ENSG00000133063 - chitinase 1
	PMM1 Gene (Entity type)	ENSG00000100417 - phosphomannomutase 1
	PEX6 Gene (Entity type)	ENSG00000124587 - peroxisomal biogenesis factor 6
	KL Gene (Entity type)	ENSG00000133116 - klotho
	ESM1 Gene (Entity type)	ENSG00000164283 - endothelial cell specific molecule 1
	CDC34 Gene (Entity type)	ENSG00000099804 - cell division cycle 34, ubiquitin conjugating enzyme
	OAZ3 Gene (Entity type)	ENSG00000143450 - ornithine decarboxylase antizyme 3
	SBF1 Gene (Entity type)	ENSG00000100241 - SET binding factor 1
	TUG1 Gene (Entity type)	ENSG00000253352 - taurine up-regulated 1

HPGDS

Gene (Entity type)

ENSG00000163106 - hematopoietic prostaglandin D synthase

CHIT1

Gene (Entity type)

ENSG00000133063 - chitinase 1

PMM1

Gene (Entity type)

ENSG00000100417 - phosphomannomutase 1

PEX6

Gene (Entity type)

ENSG00000124587 - peroxisomal biogenesis factor 6

Gene (Entity type)

ENSG00000133116 - klotho

ESM1

Gene (Entity type)

ENSG00000164283 - endothelial cell specific molecule 1

CDC34

Gene (Entity type)

ENSG00000099804 - cell division cycle 34, ubiquitin conjugating enzyme

OAZ3

Gene (Entity type)

ENSG00000143450 - ornithine decarboxylase antizyme 3

SBF1

Gene (Entity type)

ENSG00000100241 - SET binding factor 1

TUG1

Gene (Entity type)

ENSG00000253352 - taurine up-regulated 1

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Community

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.