HIBCH Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with HIBCH Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with HIBCH Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with HIBCH Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with HIBCH Up.

Results found

Linked to

	Label	Description
	NR1H3 Gene (Entity type)	ENSG00000025434 - nuclear receptor subfamily 1 group H member 3
	TRIM9 Gene (Entity type)	ENSG00000100505 - tripartite motif containing 9
	TRAF3 Gene (Entity type)	ENSG00000131323 - TNF receptor associated factor 3
	DOK4 Gene (Entity type)	ENSG00000125170 - docking protein 4
	APOBEC3A Gene (Entity type)	ENSG00000128383 - apolipoprotein B mRNA editing enzyme catalytic subunit 3A
	TICAM1 Gene (Entity type)	ENSG00000127666 - TIR domain containing adaptor molecule 1
	PSPC1 Gene (Entity type)	ENSG00000121390 - paraspeckle component 1
	CCDC88C Gene (Entity type)	ENSG00000015133 - coiled-coil and HOOK domain protein 88C
	SAP18 Gene (Entity type)	ENSG00000150459 - Sin3A associated protein 18
	LIPT1 Gene (Entity type)	ENSG00000144182 - lipoyltransferase 1

NR1H3

Gene (Entity type)

ENSG00000025434 - nuclear receptor subfamily 1 group H member 3

TRIM9

Gene (Entity type)

ENSG00000100505 - tripartite motif containing 9

TRAF3

Gene (Entity type)

ENSG00000131323 - TNF receptor associated factor 3

DOK4

Gene (Entity type)

ENSG00000125170 - docking protein 4

APOBEC3A

Gene (Entity type)

ENSG00000128383 - apolipoprotein B mRNA editing enzyme catalytic subunit 3A

TICAM1

Gene (Entity type)

ENSG00000127666 - TIR domain containing adaptor molecule 1

PSPC1

Gene (Entity type)

ENSG00000121390 - paraspeckle component 1

CCDC88C

Gene (Entity type)

ENSG00000015133 - coiled-coil and HOOK domain protein 88C

SAP18

Gene (Entity type)

ENSG00000150459 - Sin3A associated protein 18

LIPT1

Gene (Entity type)

ENSG00000144182 - lipoyltransferase 1

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.