PRKDC Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with PRKDC Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with PRKDC Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with PRKDC Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with PRKDC Up.

Results found

Linked to

	Label	Description
	GTF2H3 Gene (Entity type)	ENSG00000111358 - general transcription factor IIH subunit 3
	TMEM41B Gene (Entity type)	ENSG00000166471 - transmembrane protein 41B
	P3H4 Gene (Entity type)	ENSG00000141696 - prolyl 3-hydroxylase family member 4 (inactive)
	VIPR1 Gene (Entity type)	ENSG00000114812 - vasoactive intestinal peptide receptor 1
	DIP2A Gene (Entity type)	ENSG00000160305 - DIP2 acetate--CoA ligase A
	FCN3 Gene (Entity type)	ENSG00000142748 - ficolin 3
	MNT Gene (Entity type)	ENSG00000070444 - MAX network transcriptional repressor
	TAOK1 Gene (Entity type)	ENSG00000160551 - TAO kinase 1
	ZNF611 Gene (Entity type)	ENSG00000213020 - zinc finger protein 611
	SULT1A2 Gene (Entity type)	ENSG00000197165 - sulfotransferase family 1A member 2

GTF2H3

Gene (Entity type)

ENSG00000111358 - general transcription factor IIH subunit 3

TMEM41B

Gene (Entity type)

ENSG00000166471 - transmembrane protein 41B

P3H4

Gene (Entity type)

ENSG00000141696 - prolyl 3-hydroxylase family member 4 (inactive)

VIPR1

Gene (Entity type)

ENSG00000114812 - vasoactive intestinal peptide receptor 1

DIP2A

Gene (Entity type)

ENSG00000160305 - DIP2 acetate--CoA ligase A

FCN3

Gene (Entity type)

ENSG00000142748 - ficolin 3

MNT

Gene (Entity type)

ENSG00000070444 - MAX network transcriptional repressor

TAOK1

Gene (Entity type)

ENSG00000160551 - TAO kinase 1

ZNF611

Gene (Entity type)

ENSG00000213020 - zinc finger protein 611

SULT1A2

Gene (Entity type)

ENSG00000197165 - sulfotransferase family 1A member 2

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.