NAGPA Down (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with NAGPA Down.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with NAGPA Down.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with NAGPA Down.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with NAGPA Down.

Results found

Linked to

	Label	Description
	GTF2H3 Gene (Entity type)	ENSG00000111358 - general transcription factor IIH subunit 3
	DNPH1 Gene (Entity type)	ENSG00000112667 - 2'-deoxynucleoside 5'-phosphate N-hydrolase 1
	TBXAS1 Gene (Entity type)	ENSG00000059377 - thromboxane A synthase 1
	POLR2E Gene (Entity type)	ENSG00000099817 - RNA polymerase II, I and III subunit E
	VPS51 Gene (Entity type)	ENSG00000149823 - VPS51 subunit of GARP complex
	CYB5R3 Gene (Entity type)	ENSG00000100243 - cytochrome b5 reductase 3
	TCF25 Gene (Entity type)	ENSG00000141002 - TCF25 ribosome quality control complex subunit
	APEH Gene (Entity type)	ENSG00000164062 - acylaminoacyl-peptide hydrolase
	TUFM Gene (Entity type)	ENSG00000178952 - Tu translation elongation factor, mitochondrial
	NF2 Gene (Entity type)	ENSG00000186575 - NF2, moesin-ezrin-radixin like (MERLIN) tumor suppressor

GTF2H3

Gene (Entity type)

ENSG00000111358 - general transcription factor IIH subunit 3

DNPH1

Gene (Entity type)

ENSG00000112667 - 2'-deoxynucleoside 5'-phosphate N-hydrolase 1

TBXAS1

Gene (Entity type)

ENSG00000059377 - thromboxane A synthase 1

POLR2E

Gene (Entity type)

ENSG00000099817 - RNA polymerase II, I and III subunit E

VPS51

Gene (Entity type)

ENSG00000149823 - VPS51 subunit of GARP complex

CYB5R3

Gene (Entity type)

ENSG00000100243 - cytochrome b5 reductase 3

TCF25

Gene (Entity type)

ENSG00000141002 - TCF25 ribosome quality control complex subunit

APEH

Gene (Entity type)

ENSG00000164062 - acylaminoacyl-peptide hydrolase

TUFM

Gene (Entity type)

ENSG00000178952 - Tu translation elongation factor, mitochondrial

NF2

Gene (Entity type)

ENSG00000186575 - NF2, moesin-ezrin-radixin like (MERLIN) tumor suppressor

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.