GSE224004 GSE224005 CHD4 EWS-FLI1 knockdown 0 v 5 human up (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE224004_GSE224005_CHD4_EWS-FLI1 knockdown_0_v_5_human_up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE224004_GSE224005_CHD4_EWS-FLI1 knockdown_0_v_5_human_up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE224004_GSE224005_CHD4_EWS-FLI1 knockdown_0_v_5_human_up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE224004_GSE224005_CHD4_EWS-FLI1 knockdown_0_v_5_human_up.

Results found

Linked to

	Label	Description
	EGF Gene (Entity type)	ENSG00000138798 - epidermal growth factor
	HDAC6 Gene (Entity type)	ENSG00000094631 - histone deacetylase 6
	CHMP2A Gene (Entity type)	ENSG00000130724 - charged multivesicular body protein 2A
	CAMK1 Gene (Entity type)	ENSG00000134072 - calcium/calmodulin dependent protein kinase I
	PJA1 Gene (Entity type)	ENSG00000181191 - praja ring finger ubiquitin ligase 1
	HDAC5 Gene (Entity type)	ENSG00000108840 - histone deacetylase 5
	NDUFB1 Gene (Entity type)	ENSG00000183648 - NADH:ubiquinone oxidoreductase subunit B1
	IGFBP7 Gene (Entity type)	ENSG00000163453 - insulin like growth factor binding protein 7
	TRAF1 Gene (Entity type)	ENSG00000056558 - TNF receptor associated factor 1
	TNFRSF14 Gene (Entity type)	ENSG00000157873 - TNF receptor superfamily member 14

EGF

Gene (Entity type)

ENSG00000138798 - epidermal growth factor

HDAC6

Gene (Entity type)

ENSG00000094631 - histone deacetylase 6

CHMP2A

Gene (Entity type)

ENSG00000130724 - charged multivesicular body protein 2A

CAMK1

Gene (Entity type)

ENSG00000134072 - calcium/calmodulin dependent protein kinase I

PJA1

Gene (Entity type)

ENSG00000181191 - praja ring finger ubiquitin ligase 1

HDAC5

Gene (Entity type)

ENSG00000108840 - histone deacetylase 5

NDUFB1

Gene (Entity type)

ENSG00000183648 - NADH:ubiquinone oxidoreductase subunit B1

IGFBP7

Gene (Entity type)

ENSG00000163453 - insulin like growth factor binding protein 7

TRAF1

Gene (Entity type)

ENSG00000056558 - TNF receptor associated factor 1

TNFRSF14

Gene (Entity type)

ENSG00000157873 - TNF receptor superfamily member 14

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.