GSE224004 GSE224005 CHD4 EWS-FLI1 knockdown 0 v 5 human up (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE224004_GSE224005_CHD4_EWS-FLI1 knockdown_0_v_5_human_up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE224004_GSE224005_CHD4_EWS-FLI1 knockdown_0_v_5_human_up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE224004_GSE224005_CHD4_EWS-FLI1 knockdown_0_v_5_human_up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE224004_GSE224005_CHD4_EWS-FLI1 knockdown_0_v_5_human_up.

Results found

Linked to

	Label	Description
	TRIM16L Gene (Entity type)	ENSG00000291110 - tripartite motif containing 16 like (pseudogene)
	POU3F3 Gene (Entity type)	ENSG00000269707 - POU class 3 homeobox 3
	PAX8-AS1 Gene (Entity type)	ENSG00000189223 - PAX8 antisense RNA 1
	CASTOR3P Gene (Entity type)	ENSG00000291122 - CASTOR family member 3, pseudogene
	CUTALP Gene (Entity type)	ENSG00000293514 - cutA divalent cation tolerance like, pseudogene
	BAIAP2-DT Gene (Entity type)	ENSG00000226137 - BAIAP2 divergent transcript
	FGD5-AS1 Gene (Entity type)	ENSG00000225733 - FGD5 antisense RNA 1
	LINC03040 Gene (Entity type)	ENSG00000181577 - long intergenic non-protein coding RNA 3040
	LINC00667 Gene (Entity type)	ENSG00000263753 - long intergenic non-protein coding RNA 667
	LINC02593 Gene (Entity type)	ENSG00000223764 - long intergenic non-protein coding RNA 2593

TRIM16L

Gene (Entity type)

ENSG00000291110 - tripartite motif containing 16 like (pseudogene)

POU3F3

Gene (Entity type)

ENSG00000269707 - POU class 3 homeobox 3

PAX8-AS1

Gene (Entity type)

ENSG00000189223 - PAX8 antisense RNA 1

CASTOR3P

Gene (Entity type)

ENSG00000291122 - CASTOR family member 3, pseudogene

CUTALP

Gene (Entity type)

ENSG00000293514 - cutA divalent cation tolerance like, pseudogene

BAIAP2-DT

Gene (Entity type)

ENSG00000226137 - BAIAP2 divergent transcript

FGD5-AS1

Gene (Entity type)

ENSG00000225733 - FGD5 antisense RNA 1

LINC03040

Gene (Entity type)

ENSG00000181577 - long intergenic non-protein coding RNA 3040

LINC00667

Gene (Entity type)

ENSG00000263753 - long intergenic non-protein coding RNA 667

LINC02593

Gene (Entity type)

ENSG00000223764 - long intergenic non-protein coding RNA 2593

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.