PIGU Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with PIGU Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with PIGU Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with PIGU Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with PIGU Up.

Results found

Linked to

	Label	Description
	KDM5A Gene (Entity type)	ENSG00000073614 - lysine demethylase 5A
	ROCK2 Gene (Entity type)	ENSG00000134318 - Rho associated coiled-coil containing protein kinase 2
	PHIP Gene (Entity type)	ENSG00000146247 - PHIP subunit of CUL4-Ring ligase complex
	NUCLEOLIN Gene (Entity type)	ENSG00000115053 - nucleolin multifunctional protein
	TUG1 Gene (Entity type)	ENSG00000253352 - taurine up-regulated 1
	VIPR1 Gene (Entity type)	ENSG00000114812 - vasoactive intestinal peptide receptor 1
	CHRM3 Gene (Entity type)	ENSG00000133019 - cholinergic receptor muscarinic 3
	VWA8 Gene (Entity type)	ENSG00000102763 - von Willebrand factor A domain containing 8
	BICD1 Gene (Entity type)	ENSG00000151746 - BICD cargo adaptor 1
	PRRC2C Gene (Entity type)	ENSG00000117523 - proline rich coiled-coil 2C

KDM5A

Gene (Entity type)

ENSG00000073614 - lysine demethylase 5A

ROCK2

Gene (Entity type)

ENSG00000134318 - Rho associated coiled-coil containing protein kinase 2

PHIP

Gene (Entity type)

ENSG00000146247 - PHIP subunit of CUL4-Ring ligase complex

NUCLEOLIN

Gene (Entity type)

ENSG00000115053 - nucleolin multifunctional protein

TUG1

Gene (Entity type)

ENSG00000253352 - taurine up-regulated 1

VIPR1

Gene (Entity type)

ENSG00000114812 - vasoactive intestinal peptide receptor 1

CHRM3

Gene (Entity type)

ENSG00000133019 - cholinergic receptor muscarinic 3

VWA8

Gene (Entity type)

ENSG00000102763 - von Willebrand factor A domain containing 8

BICD1

Gene (Entity type)

ENSG00000151746 - BICD cargo adaptor 1

PRRC2C

Gene (Entity type)

ENSG00000117523 - proline rich coiled-coil 2C

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Community

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.