CTH Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with CTH Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with CTH Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with CTH Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with CTH Up.

Results found

Linked to

	Label	Description
	CRTC3 Gene (Entity type)	ENSG00000140577 - CREB regulated transcription coactivator 3
	APOBEC3A Gene (Entity type)	ENSG00000128383 - apolipoprotein B mRNA editing enzyme catalytic subunit 3A
	DPP8 Gene (Entity type)	ENSG00000074603 - dipeptidyl peptidase 8
	UPF3B Gene (Entity type)	ENSG00000125351 - UPF3B regulator of nonsense mediated mRNA decay
	ZMYND11 Gene (Entity type)	ENSG00000015171 - zinc finger MYND-type containing 11
	PCBP4 Gene (Entity type)	ENSG00000090097 - poly(rC) binding protein 4
	STAG1 Gene (Entity type)	ENSG00000118007 - STAG1 cohesin complex component
	PPP6C Gene (Entity type)	ENSG00000119414 - protein phosphatase 6 catalytic subunit
	SEC63 Gene (Entity type)	ENSG00000025796 - SEC63 protein translocation regulator
	PGLYRP1 Gene (Entity type)	ENSG00000008438 - peptidoglycan recognition protein 1

CRTC3

Gene (Entity type)

ENSG00000140577 - CREB regulated transcription coactivator 3

APOBEC3A

Gene (Entity type)

ENSG00000128383 - apolipoprotein B mRNA editing enzyme catalytic subunit 3A

DPP8

Gene (Entity type)

ENSG00000074603 - dipeptidyl peptidase 8

UPF3B

Gene (Entity type)

ENSG00000125351 - UPF3B regulator of nonsense mediated mRNA decay

ZMYND11

Gene (Entity type)

ENSG00000015171 - zinc finger MYND-type containing 11

PCBP4

Gene (Entity type)

ENSG00000090097 - poly(rC) binding protein 4

STAG1

Gene (Entity type)

ENSG00000118007 - STAG1 cohesin complex component

PPP6C

Gene (Entity type)

ENSG00000119414 - protein phosphatase 6 catalytic subunit

SEC63

Gene (Entity type)

ENSG00000025796 - SEC63 protein translocation regulator

PGLYRP1

Gene (Entity type)

ENSG00000008438 - peptidoglycan recognition protein 1

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.