GIMAP6 Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GIMAP6 Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GIMAP6 Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GIMAP6 Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GIMAP6 Up.

Results found

Linked to

	Label	Description
	SMC3 Gene (Entity type)	ENSG00000108055 - structural maintenance of chromosomes 3
	MYBPC2 Gene (Entity type)	ENSG00000086967 - myosin binding protein C2
	SENP6 Gene (Entity type)	ENSG00000112701 - SUMO specific peptidase 6
	SMG7 Gene (Entity type)	ENSG00000116698 - SMG7 nonsense mediated mRNA decay factor
	TNKS Gene (Entity type)	ENSG00000173273 - tankyrase
	HERC2 Gene (Entity type)	ENSG00000128731 - HECT and RLD domain containing E3 ubiquitin protein ligase 2
	PRR16 Gene (Entity type)	ENSG00000184838 - proline rich 16
	SOCS5 Gene (Entity type)	ENSG00000171150 - suppressor of cytokine signaling 5
	NAA40 Gene (Entity type)	ENSG00000110583 - N-alpha-acetyltransferase 40, NatD catalytic subunit
	AKAP11 Gene (Entity type)	ENSG00000023516 - A-kinase anchoring protein 11

SMC3

Gene (Entity type)

ENSG00000108055 - structural maintenance of chromosomes 3

MYBPC2

Gene (Entity type)

ENSG00000086967 - myosin binding protein C2

SENP6

Gene (Entity type)

ENSG00000112701 - SUMO specific peptidase 6

SMG7

Gene (Entity type)

ENSG00000116698 - SMG7 nonsense mediated mRNA decay factor

TNKS

Gene (Entity type)

ENSG00000173273 - tankyrase

HERC2

Gene (Entity type)

ENSG00000128731 - HECT and RLD domain containing E3 ubiquitin protein ligase 2

PRR16

Gene (Entity type)

ENSG00000184838 - proline rich 16

SOCS5

Gene (Entity type)

ENSG00000171150 - suppressor of cytokine signaling 5

NAA40

Gene (Entity type)

ENSG00000110583 - N-alpha-acetyltransferase 40, NatD catalytic subunit

AKAP11

Gene (Entity type)

ENSG00000023516 - A-kinase anchoring protein 11

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.