GSE246983 CDK12 knockdown LNCaP C4-2 Cyclin-Dependent Kinases 1 v 0 human up (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE246983_CDK12 knockdown_LNCaP C4-2_Cyclin-Dependent Kinases_1_v_0_human_up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE246983_CDK12 knockdown_LNCaP C4-2_Cyclin-Dependent Kinases_1_v_0_human_up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE246983_CDK12 knockdown_LNCaP C4-2_Cyclin-Dependent Kinases_1_v_0_human_up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE246983_CDK12 knockdown_LNCaP C4-2_Cyclin-Dependent Kinases_1_v_0_human_up.

Results found

Linked to

	Label	Description
	CAPN1-AS1 Gene (Entity type)	CAPN1 antisense RNA 1
	LOC124909412 Gene (Entity type)	uncharacterized LOC124909412
	DDX11L1 Gene (Entity type)	DEAD/H-box helicase 11 like 1 (pseudogene)
	HSPA8P1 Gene (Entity type)	heat shock protein family A (Hsp70) member 8 pseudogene 1
	TPSP2 Gene (Entity type)	tryptase pseudogene 2
	MIR378D2HG Gene (Entity type)	MIR378D2 host gene
	CTB-30L5.1 Gene (Entity type)	uncharacterized CTB-30L5.1
	FOXO6-AS1 Gene (Entity type)	FOXO6 antisense RNA 1
	LOC102724684 Gene (Entity type)	uncharacterized LOC102724684
	SLURP2-AS1 Gene (Entity type)	SLURP2 antisense RNA 1

CAPN1-AS1

Gene (Entity type)

CAPN1 antisense RNA 1

LOC124909412

Gene (Entity type)

uncharacterized LOC124909412

DDX11L1

Gene (Entity type)

DEAD/H-box helicase 11 like 1 (pseudogene)

HSPA8P1

Gene (Entity type)

heat shock protein family A (Hsp70) member 8 pseudogene 1

TPSP2

Gene (Entity type)

tryptase pseudogene 2

MIR378D2HG

Gene (Entity type)

MIR378D2 host gene

CTB-30L5.1

Gene (Entity type)

uncharacterized CTB-30L5.1

FOXO6-AS1

Gene (Entity type)

FOXO6 antisense RNA 1

LOC102724684

Gene (Entity type)

uncharacterized LOC102724684

SLURP2-AS1

Gene (Entity type)

SLURP2 antisense RNA 1

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.