ELK4 Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with ELK4 Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with ELK4 Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with ELK4 Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with ELK4 Up.

Results found

Linked to

	Label	Description
	OGFOD1 Gene (Entity type)	ENSG00000087263 - 2-oxoglutarate and iron dependent oxygenase domain containing 1
	NAE1 Gene (Entity type)	ENSG00000159593 - NEDD8 activating enzyme E1 subunit 1
	PPP1CB Gene (Entity type)	ENSG00000213639 - protein phosphatase 1 catalytic subunit beta
	TFCP2L1 Gene (Entity type)	ENSG00000115112 - transcription factor CP2 like 1
	COX6B1 Gene (Entity type)	ENSG00000126267 - cytochrome c oxidase subunit 6B1
	COX4I1 Gene (Entity type)	ENSG00000131143 - cytochrome c oxidase subunit 4I1
	KLHDC8A Gene (Entity type)	ENSG00000162873 - kelch domain containing 8A
	MT3 Gene (Entity type)	ENSG00000087250 - metallothionein 3
	SLC35A5 Gene (Entity type)	ENSG00000138459 - solute carrier family 35 member A5
	MRPL39 Gene (Entity type)	ENSG00000154719 - mitochondrial ribosomal protein L39

OGFOD1

Gene (Entity type)

ENSG00000087263 - 2-oxoglutarate and iron dependent oxygenase domain containing 1

NAE1

Gene (Entity type)

ENSG00000159593 - NEDD8 activating enzyme E1 subunit 1

PPP1CB

Gene (Entity type)

ENSG00000213639 - protein phosphatase 1 catalytic subunit beta

TFCP2L1

Gene (Entity type)

ENSG00000115112 - transcription factor CP2 like 1

COX6B1

Gene (Entity type)

ENSG00000126267 - cytochrome c oxidase subunit 6B1

COX4I1

Gene (Entity type)

ENSG00000131143 - cytochrome c oxidase subunit 4I1

KLHDC8A

Gene (Entity type)

ENSG00000162873 - kelch domain containing 8A

MT3

Gene (Entity type)

ENSG00000087250 - metallothionein 3

SLC35A5

Gene (Entity type)

ENSG00000138459 - solute carrier family 35 member A5

MRPL39

Gene (Entity type)

ENSG00000154719 - mitochondrial ribosomal protein L39

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Community

Resources

@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.