PHKB Down (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with PHKB Down.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with PHKB Down.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with PHKB Down.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with PHKB Down.

Results found

Linked to

	Label	Description
	TDG Gene (Entity type)	ENSG00000139372 - thymine DNA glycosylase
	CDK17 Gene (Entity type)	ENSG00000059758 - cyclin dependent kinase 17
	UVRAG Gene (Entity type)	ENSG00000198382 - UV radiation resistance associated
	ARAP3 Gene (Entity type)	ENSG00000120318 - ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3
	PTBP2 Gene (Entity type)	ENSG00000117569 - polypyrimidine tract binding protein 2
	CLDN5 Gene (Entity type)	ENSG00000184113 - claudin 5
	GLRB Gene (Entity type)	ENSG00000109738 - glycine receptor beta
	FBXO3 Gene (Entity type)	ENSG00000110429 - F-box protein 3
	APH1A Gene (Entity type)	ENSG00000117362 - aph-1A gamma-secretase subunit
	EIF4E2 Gene (Entity type)	ENSG00000135930 - eukaryotic translation initiation factor 4E family member 2

TDG

Gene (Entity type)

ENSG00000139372 - thymine DNA glycosylase

CDK17

Gene (Entity type)

ENSG00000059758 - cyclin dependent kinase 17

UVRAG

Gene (Entity type)

ENSG00000198382 - UV radiation resistance associated

ARAP3

Gene (Entity type)

ENSG00000120318 - ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3

PTBP2

Gene (Entity type)

ENSG00000117569 - polypyrimidine tract binding protein 2

CLDN5

Gene (Entity type)

ENSG00000184113 - claudin 5

GLRB

Gene (Entity type)

ENSG00000109738 - glycine receptor beta

FBXO3

Gene (Entity type)

ENSG00000110429 - F-box protein 3

APH1A

Gene (Entity type)

ENSG00000117362 - aph-1A gamma-secretase subunit

EIF4E2

Gene (Entity type)

ENSG00000135930 - eukaryotic translation initiation factor 4E family member 2

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Community

Resources

@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.