GSE52133 LIN-41 knockdown 0 v 1 human dn (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE52133_LIN-41 knockdown_0_v_1_human_dn.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE52133_LIN-41 knockdown_0_v_1_human_dn.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE52133_LIN-41 knockdown_0_v_1_human_dn.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE52133_LIN-41 knockdown_0_v_1_human_dn.

Results found

Linked to

	Label	Description
	SNHG5 Gene (Entity type)	small nucleolar RNA host gene 5
	ABCF2-H2BK1 Gene (Entity type)	ABCF2-H2BK1 readthrough
	FEZF1-AS1 Gene (Entity type)	FEZF1 antisense RNA 1
	NUTM2A-AS1 Gene (Entity type)	NUTM2A antisense RNA 1
	SMPD4BP Gene (Entity type)	sphingomyelin phosphodiesterase 4B, pseudogene
	LPAL2 Gene (Entity type)	lipoprotein(a) like 2 (pseudogene)
	FAM222A-AS1 Gene (Entity type)	FAM222A antisense RNA 1
	ABCA11P Gene (Entity type)	ATP binding cassette subfamily A member 11, pseudogene
	JAKMIP2-AS1 Gene (Entity type)	JAKMIP2 antisense RNA 1
	LINC00499 Gene (Entity type)	long intergenic non-protein coding RNA 499

SNHG5

Gene (Entity type)

small nucleolar RNA host gene 5

ABCF2-H2BK1

Gene (Entity type)

ABCF2-H2BK1 readthrough

FEZF1-AS1

Gene (Entity type)

FEZF1 antisense RNA 1

NUTM2A-AS1

Gene (Entity type)

NUTM2A antisense RNA 1

SMPD4BP

Gene (Entity type)

sphingomyelin phosphodiesterase 4B, pseudogene

LPAL2

Gene (Entity type)

lipoprotein(a) like 2 (pseudogene)

FAM222A-AS1

Gene (Entity type)

FAM222A antisense RNA 1

ABCA11P

Gene (Entity type)

ATP binding cassette subfamily A member 11, pseudogene

JAKMIP2-AS1

Gene (Entity type)

JAKMIP2 antisense RNA 1

LINC00499

Gene (Entity type)

long intergenic non-protein coding RNA 499

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Community

Resources

@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.