NME2 Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with NME2 Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with NME2 Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with NME2 Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with NME2 Up.

Results found

Linked to

	Label	Description
	CORO1B Gene (Entity type)	ENSG00000172725 - coronin 1B
	BBOF1 Gene (Entity type)	ENSG00000119636 - basal body orientation factor 1
	TNFRSF14 Gene (Entity type)	ENSG00000157873 - TNF receptor superfamily member 14
	CFAP298 Gene (Entity type)	ENSG00000159079 - cilia and flagella associated protein 298
	PANK2 Gene (Entity type)	ENSG00000125779 - pantothenate kinase 2
	FGGY Gene (Entity type)	ENSG00000172456 - FGGY carbohydrate kinase domain containing
	GPATCH2 Gene (Entity type)	ENSG00000092978 - G-patch domain containing 2
	PIBF1 Gene (Entity type)	ENSG00000083535 - progesterone immunomodulatory binding factor 1
	TESK1 Gene (Entity type)	ENSG00000107140 - testis associated actin remodelling kinase 1
	IFT20 Gene (Entity type)	ENSG00000109083 - intraflagellar transport 20

CORO1B

Gene (Entity type)

ENSG00000172725 - coronin 1B

BBOF1

Gene (Entity type)

ENSG00000119636 - basal body orientation factor 1

TNFRSF14

Gene (Entity type)

ENSG00000157873 - TNF receptor superfamily member 14

CFAP298

Gene (Entity type)

ENSG00000159079 - cilia and flagella associated protein 298

PANK2

Gene (Entity type)

ENSG00000125779 - pantothenate kinase 2

FGGY

Gene (Entity type)

ENSG00000172456 - FGGY carbohydrate kinase domain containing

GPATCH2

Gene (Entity type)

ENSG00000092978 - G-patch domain containing 2

PIBF1

Gene (Entity type)

ENSG00000083535 - progesterone immunomodulatory binding factor 1

TESK1

Gene (Entity type)

ENSG00000107140 - testis associated actin remodelling kinase 1

IFT20

Gene (Entity type)

ENSG00000109083 - intraflagellar transport 20

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Community

Resources

@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.