AMIGO1 Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with AMIGO1 Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with AMIGO1 Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with AMIGO1 Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with AMIGO1 Up.

Results found

Linked to

	Label	Description
	GNG5 Gene (Entity type)	ENSG00000174021 - G protein subunit gamma 5
	CTBS Gene (Entity type)	ENSG00000117151 - chitobiase
	GSK3B Gene (Entity type)	ENSG00000082701 - glycogen synthase kinase 3 beta
	FKBP2 Gene (Entity type)	ENSG00000173486 - FKBP prolyl isomerase 2
	ATP13A1 Gene (Entity type)	ENSG00000105726 - ATPase 13A1
	KDM5A Gene (Entity type)	ENSG00000073614 - lysine demethylase 5A
	CEPT1 Gene (Entity type)	ENSG00000134255 - choline/ethanolamine phosphotransferase 1

GNG5

Gene (Entity type)

ENSG00000174021 - G protein subunit gamma 5

CTBS

Gene (Entity type)

ENSG00000117151 - chitobiase

GSK3B

Gene (Entity type)

ENSG00000082701 - glycogen synthase kinase 3 beta

FKBP2

Gene (Entity type)

ENSG00000173486 - FKBP prolyl isomerase 2

ATP13A1

Gene (Entity type)

ENSG00000105726 - ATPase 13A1

KDM5A

Gene (Entity type)

ENSG00000073614 - lysine demethylase 5A

CEPT1

Gene (Entity type)

ENSG00000134255 - choline/ethanolamine phosphotransferase 1

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Community

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.