GSE238116 EGR1 HCC overexpression MHCC97-H PLC-PRF-5 3 v 0 human up (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE238116_EGR1_HCC overexpression_MHCC97-H_PLC-PRF-5_3_v_0_human_up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE238116_EGR1_HCC overexpression_MHCC97-H_PLC-PRF-5_3_v_0_human_up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE238116_EGR1_HCC overexpression_MHCC97-H_PLC-PRF-5_3_v_0_human_up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE238116_EGR1_HCC overexpression_MHCC97-H_PLC-PRF-5_3_v_0_human_up.

Results found

Linked to

	Label	Description
	PKD1P1 Gene (Entity type)	polycystin 1, transient receptor potential channel interacting pseudogene 1
	SNHG3 Gene (Entity type)	small nucleolar RNA host gene 3
	CROCCP2 Gene (Entity type)	CROCC pseudogene 2
	SNHG15 Gene (Entity type)	small nucleolar RNA host gene 15
	HERC2P2 Gene (Entity type)	HERC2 pseudogene 2
	CRNDE Gene (Entity type)	colorectal neoplasia differentially expressed
	LINC02593 Gene (Entity type)	long intergenic non-protein coding RNA 2593
	ZNF883 Gene (Entity type)	zinc finger protein 883
	MIR34AHG Gene (Entity type)	MIR34A host gene
	LINC-PINT Gene (Entity type)	long intergenic non-protein coding RNA, p53 induced transcript

PKD1P1

Gene (Entity type)

polycystin 1, transient receptor potential channel interacting pseudogene 1

SNHG3

Gene (Entity type)

small nucleolar RNA host gene 3

CROCCP2

Gene (Entity type)

CROCC pseudogene 2

SNHG15

Gene (Entity type)

small nucleolar RNA host gene 15

HERC2P2

Gene (Entity type)

HERC2 pseudogene 2

CRNDE

Gene (Entity type)

colorectal neoplasia differentially expressed

LINC02593

Gene (Entity type)

long intergenic non-protein coding RNA 2593

ZNF883

Gene (Entity type)

zinc finger protein 883

MIR34AHG

Gene (Entity type)

MIR34A host gene

LINC-PINT

Gene (Entity type)

long intergenic non-protein coding RNA, p53 induced transcript

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.