MME Down (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with MME Down.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with MME Down.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with MME Down.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with MME Down.

Results found

Linked to

	Label	Description
	GABPB1 Gene (Entity type)	ENSG00000104064 - GA binding protein transcription factor subunit beta 1
	E2F5 Gene (Entity type)	ENSG00000133740 - E2F transcription factor 5
	LRRC41 Gene (Entity type)	ENSG00000132128 - leucine rich repeat containing 41
	RBM5 Gene (Entity type)	ENSG00000003756 - RNA binding motif protein 5
	STN1 Gene (Entity type)	ENSG00000107960 - STN1 subunit of CST complex
	PREPL Gene (Entity type)	ENSG00000138078 - prolyl endopeptidase like
	CHD1 Gene (Entity type)	ENSG00000153922 - chromodomain helicase DNA binding protein 1
	KMT2A Gene (Entity type)	ENSG00000118058 - lysine methyltransferase 2A
	PAPPA Gene (Entity type)	ENSG00000182752 - pappalysin 1
	PTPN2 Gene (Entity type)	ENSG00000175354 - protein tyrosine phosphatase non-receptor type 2

GABPB1

Gene (Entity type)

ENSG00000104064 - GA binding protein transcription factor subunit beta 1

E2F5

Gene (Entity type)

ENSG00000133740 - E2F transcription factor 5

LRRC41

Gene (Entity type)

ENSG00000132128 - leucine rich repeat containing 41

RBM5

Gene (Entity type)

ENSG00000003756 - RNA binding motif protein 5

STN1

Gene (Entity type)

ENSG00000107960 - STN1 subunit of CST complex

PREPL

Gene (Entity type)

ENSG00000138078 - prolyl endopeptidase like

CHD1

Gene (Entity type)

ENSG00000153922 - chromodomain helicase DNA binding protein 1

KMT2A

Gene (Entity type)

ENSG00000118058 - lysine methyltransferase 2A

PAPPA

Gene (Entity type)

ENSG00000182752 - pappalysin 1

PTPN2

Gene (Entity type)

ENSG00000175354 - protein tyrosine phosphatase non-receptor type 2

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.