PTPN7 Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with PTPN7 Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with PTPN7 Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with PTPN7 Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with PTPN7 Up.

Results found

Linked to

	Label	Description
	COPS5 Gene (Entity type)	ENSG00000121022 - COP9 signalosome subunit 5
	ADPRM Gene (Entity type)	ENSG00000170222 - ADP-ribose/CDP-alcohol diphosphatase, manganese dependent
	ELOC Gene (Entity type)	ENSG00000154582 - elongin C
	DENND4C Gene (Entity type)	ENSG00000137145 - DENN domain containing 4C
	ZNF430 Gene (Entity type)	ENSG00000118620 - zinc finger protein 430
	TCP11L1 Gene (Entity type)	ENSG00000176148 - t-complex 11 like 1
	APOBEC3A Gene (Entity type)	ENSG00000128383 - apolipoprotein B mRNA editing enzyme catalytic subunit 3A
	MRPS28 Gene (Entity type)	ENSG00000147586 - mitochondrial ribosomal protein S28
	SLC35E1 Gene (Entity type)	ENSG00000127526 - solute carrier family 35 member E1
	NDUFS4 Gene (Entity type)	ENSG00000164258 - NADH:ubiquinone oxidoreductase subunit S4

COPS5

Gene (Entity type)

ENSG00000121022 - COP9 signalosome subunit 5

ADPRM

Gene (Entity type)

ENSG00000170222 - ADP-ribose/CDP-alcohol diphosphatase, manganese dependent

ELOC

Gene (Entity type)

ENSG00000154582 - elongin C

DENND4C

Gene (Entity type)

ENSG00000137145 - DENN domain containing 4C

ZNF430

Gene (Entity type)

ENSG00000118620 - zinc finger protein 430

TCP11L1

Gene (Entity type)

ENSG00000176148 - t-complex 11 like 1

APOBEC3A

Gene (Entity type)

ENSG00000128383 - apolipoprotein B mRNA editing enzyme catalytic subunit 3A

MRPS28

Gene (Entity type)

ENSG00000147586 - mitochondrial ribosomal protein S28

SLC35E1

Gene (Entity type)

ENSG00000127526 - solute carrier family 35 member E1

NDUFS4

Gene (Entity type)

ENSG00000164258 - NADH:ubiquinone oxidoreductase subunit S4

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Community

Resources

@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.