PTPN7 Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with PTPN7 Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with PTPN7 Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with PTPN7 Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with PTPN7 Up.

Results found

Linked to

	Label	Description
	OGFOD1 Gene (Entity type)	ENSG00000087263 - 2-oxoglutarate and iron dependent oxygenase domain containing 1
	NSA2 Gene (Entity type)	ENSG00000164346 - NSA2 ribosome biogenesis factor
	NRBF2 Gene (Entity type)	ENSG00000148572 - nuclear receptor binding factor 2
	CDR2 Gene (Entity type)	ENSG00000140743 - cerebellar degeneration related protein 2
	ATF6 Gene (Entity type)	ENSG00000118217 - activating transcription factor 6
	APOBEC3A Gene (Entity type)	ENSG00000128383 - apolipoprotein B mRNA editing enzyme catalytic subunit 3A
	TMCC1 Gene (Entity type)	ENSG00000172765 - transmembrane and coiled-coil domain family 1
	LSM1 Gene (Entity type)	ENSG00000175324 - LSM1 homolog, mRNA degradation associated
	RPL26L1 Gene (Entity type)	ENSG00000037241 - ribosomal protein L26 like 1
	PHACTR4 Gene (Entity type)	ENSG00000204138 - phosphatase and actin regulator 4

OGFOD1

Gene (Entity type)

ENSG00000087263 - 2-oxoglutarate and iron dependent oxygenase domain containing 1

NSA2

Gene (Entity type)

ENSG00000164346 - NSA2 ribosome biogenesis factor

NRBF2

Gene (Entity type)

ENSG00000148572 - nuclear receptor binding factor 2

CDR2

Gene (Entity type)

ENSG00000140743 - cerebellar degeneration related protein 2

ATF6

Gene (Entity type)

ENSG00000118217 - activating transcription factor 6

APOBEC3A

Gene (Entity type)

ENSG00000128383 - apolipoprotein B mRNA editing enzyme catalytic subunit 3A

TMCC1

Gene (Entity type)

ENSG00000172765 - transmembrane and coiled-coil domain family 1

LSM1

Gene (Entity type)

ENSG00000175324 - LSM1 homolog, mRNA degradation associated

RPL26L1

Gene (Entity type)

ENSG00000037241 - ribosomal protein L26 like 1

PHACTR4

Gene (Entity type)

ENSG00000204138 - phosphatase and actin regulator 4

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Community

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.