CTRC Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with CTRC Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with CTRC Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with CTRC Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with CTRC Up.

Results found

Linked to

	Label	Description
	PIGB Gene (Entity type)	ENSG00000069943 - phosphatidylinositol glycan anchor biosynthesis class B
	GOLPH3L Gene (Entity type)	ENSG00000143457 - golgi phosphoprotein 3 like
	RBM8A Gene (Entity type)	ENSG00000265241 - RNA binding motif protein 8A
	NCKAP1L Gene (Entity type)	ENSG00000123338 - NCK associated protein 1 like
	TMPRSS11E Gene (Entity type)	ENSG00000087128 - transmembrane serine protease 11E
	RPA2 Gene (Entity type)	ENSG00000117748 - replication protein A2
	ZDHHC4 Gene (Entity type)	ENSG00000136247 - zDHHC palmitoyltransferase 4
	APOBEC3A Gene (Entity type)	ENSG00000128383 - apolipoprotein B mRNA editing enzyme catalytic subunit 3A
	MAX Gene (Entity type)	ENSG00000125952 - MYC associated transcriptional regulator X
	SERPIND1 Gene (Entity type)	ENSG00000099937 - serpin family D member 1

PIGB

Gene (Entity type)

ENSG00000069943 - phosphatidylinositol glycan anchor biosynthesis class B

GOLPH3L

Gene (Entity type)

ENSG00000143457 - golgi phosphoprotein 3 like

RBM8A

Gene (Entity type)

ENSG00000265241 - RNA binding motif protein 8A

NCKAP1L

Gene (Entity type)

ENSG00000123338 - NCK associated protein 1 like

TMPRSS11E

Gene (Entity type)

ENSG00000087128 - transmembrane serine protease 11E

RPA2

Gene (Entity type)

ENSG00000117748 - replication protein A2

ZDHHC4

Gene (Entity type)

ENSG00000136247 - zDHHC palmitoyltransferase 4

APOBEC3A

Gene (Entity type)

ENSG00000128383 - apolipoprotein B mRNA editing enzyme catalytic subunit 3A

MAX

Gene (Entity type)

ENSG00000125952 - MYC associated transcriptional regulator X

SERPIND1

Gene (Entity type)

ENSG00000099937 - serpin family D member 1

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.