GSE128255 NDP knockdown stem cell 1 v 0 human dn (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

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Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE128255_NDP knockdown_stem cell_1_v_0_human_dn.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE128255_NDP knockdown_stem cell_1_v_0_human_dn.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE128255_NDP knockdown_stem cell_1_v_0_human_dn.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE128255_NDP knockdown_stem cell_1_v_0_human_dn.

Results found

Linked to

	Label	Description
	PTPN12 Gene (Entity type)	ENSG00000127947 - protein tyrosine phosphatase non-receptor type 12
	PLOD3 Gene (Entity type)	ENSG00000106397 - procollagen-lysine,2-oxoglutarate 5-dioxygenase 3
	PFDN2 Gene (Entity type)	ENSG00000143256 - prefoldin subunit 2
	BLVRA Gene (Entity type)	ENSG00000106605 - biliverdin reductase A
	PPIA Gene (Entity type)	ENSG00000196262 - peptidylprolyl isomerase A
	FURIN Gene (Entity type)	ENSG00000140564 - furin, paired basic amino acid cleaving enzyme
	SKIC8 Gene (Entity type)	ENSG00000140395 - SKI8 subunit of superkiller complex
	DCPS Gene (Entity type)	ENSG00000110063 - decapping enzyme, scavenger
	ARPC1A Gene (Entity type)	ENSG00000241685 - actin related protein 2/3 complex subunit 1A
	TNFRSF14 Gene (Entity type)	ENSG00000157873 - TNF receptor superfamily member 14

PTPN12

Gene (Entity type)

ENSG00000127947 - protein tyrosine phosphatase non-receptor type 12

PLOD3

Gene (Entity type)

ENSG00000106397 - procollagen-lysine,2-oxoglutarate 5-dioxygenase 3

PFDN2

Gene (Entity type)

ENSG00000143256 - prefoldin subunit 2

BLVRA

Gene (Entity type)

ENSG00000106605 - biliverdin reductase A

PPIA

Gene (Entity type)

ENSG00000196262 - peptidylprolyl isomerase A

FURIN

Gene (Entity type)

ENSG00000140564 - furin, paired basic amino acid cleaving enzyme

SKIC8

Gene (Entity type)

ENSG00000140395 - SKI8 subunit of superkiller complex

DCPS

Gene (Entity type)

ENSG00000110063 - decapping enzyme, scavenger

ARPC1A

Gene (Entity type)

ENSG00000241685 - actin related protein 2/3 complex subunit 1A

TNFRSF14

Gene (Entity type)

ENSG00000157873 - TNF receptor superfamily member 14

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.