F5 Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with F5 Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with F5 Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with F5 Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with F5 Up.

Results found

Linked to

	Label	Description
	PLOD3 Gene (Entity type)	ENSG00000106397 - procollagen-lysine,2-oxoglutarate 5-dioxygenase 3
	TRAF1 Gene (Entity type)	ENSG00000056558 - TNF receptor associated factor 1
	TMPRSS11E Gene (Entity type)	ENSG00000087128 - transmembrane serine protease 11E
	RBM5 Gene (Entity type)	ENSG00000003756 - RNA binding motif protein 5
	CDC34 Gene (Entity type)	ENSG00000099804 - cell division cycle 34, ubiquitin conjugating enzyme
	IVL Gene (Entity type)	ENSG00000163207 - involucrin
	TUG1 Gene (Entity type)	ENSG00000253352 - taurine up-regulated 1
	MICAL3 Gene (Entity type)	ENSG00000243156 - microtubule associated monooxygenase, calponin and LIM domain containing 3
	TBL2 Gene (Entity type)	ENSG00000106638 - transducin beta like 2
	TGM1 Gene (Entity type)	ENSG00000092295 - transglutaminase 1

PLOD3

Gene (Entity type)

ENSG00000106397 - procollagen-lysine,2-oxoglutarate 5-dioxygenase 3

TRAF1

Gene (Entity type)

ENSG00000056558 - TNF receptor associated factor 1

TMPRSS11E

Gene (Entity type)

ENSG00000087128 - transmembrane serine protease 11E

RBM5

Gene (Entity type)

ENSG00000003756 - RNA binding motif protein 5

CDC34

Gene (Entity type)

ENSG00000099804 - cell division cycle 34, ubiquitin conjugating enzyme

IVL

Gene (Entity type)

ENSG00000163207 - involucrin

TUG1

Gene (Entity type)

ENSG00000253352 - taurine up-regulated 1

MICAL3

Gene (Entity type)

ENSG00000243156 - microtubule associated monooxygenase, calponin and LIM domain containing 3

TBL2

Gene (Entity type)

ENSG00000106638 - transducin beta like 2

TGM1

Gene (Entity type)

ENSG00000092295 - transglutaminase 1

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.