HLCS Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with HLCS Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with HLCS Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with HLCS Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with HLCS Up.

Results found

Linked to

	Label	Description
	RIC8A Gene (Entity type)	ENSG00000177963 - RIC8 guanine nucleotide exchange factor A
	SDS Gene (Entity type)	ENSG00000135094 - serine dehydratase
	POLR3E Gene (Entity type)	ENSG00000058600 - RNA polymerase III subunit E
	EIF4E2 Gene (Entity type)	ENSG00000135930 - eukaryotic translation initiation factor 4E family member 2
	AP2A2 Gene (Entity type)	ENSG00000183020 - adaptor related protein complex 2 subunit alpha 2
	LSM7 Gene (Entity type)	ENSG00000130332 - LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated
	ZNF562 Gene (Entity type)	ENSG00000171466 - zinc finger protein 562
	IGSF1 Gene (Entity type)	ENSG00000147255 - immunoglobulin superfamily member 1
	NAP1L4 Gene (Entity type)	ENSG00000205531 - nucleosome assembly protein 1 like 4
	USP47 Gene (Entity type)	ENSG00000170242 - ubiquitin specific peptidase 47

RIC8A

Gene (Entity type)

ENSG00000177963 - RIC8 guanine nucleotide exchange factor A

SDS

Gene (Entity type)

ENSG00000135094 - serine dehydratase

POLR3E

Gene (Entity type)

ENSG00000058600 - RNA polymerase III subunit E

EIF4E2

Gene (Entity type)

ENSG00000135930 - eukaryotic translation initiation factor 4E family member 2

AP2A2

Gene (Entity type)

ENSG00000183020 - adaptor related protein complex 2 subunit alpha 2

LSM7

Gene (Entity type)

ENSG00000130332 - LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated

ZNF562

Gene (Entity type)

ENSG00000171466 - zinc finger protein 562

IGSF1

Gene (Entity type)

ENSG00000147255 - immunoglobulin superfamily member 1

NAP1L4

Gene (Entity type)

ENSG00000205531 - nucleosome assembly protein 1 like 4

USP47

Gene (Entity type)

ENSG00000170242 - ubiquitin specific peptidase 47

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Community

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.