LBH Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with LBH Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with LBH Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with LBH Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with LBH Up.

Results found

Linked to

	Label	Description
	SPCS3 Gene (Entity type)	ENSG00000129128 - signal peptidase complex subunit 3
	FBXW2 Gene (Entity type)	ENSG00000119402 - F-box and WD repeat domain containing 2
	LPGAT1 Gene (Entity type)	ENSG00000123684 - lysophosphatidylglycerol acyltransferase 1
	KHK Gene (Entity type)	ENSG00000138030 - ketohexokinase
	PLA2G12A Gene (Entity type)	ENSG00000123739 - phospholipase A2 group XIIA
	TTC19 Gene (Entity type)	ENSG00000011295 - tetratricopeptide repeat domain 19
	CYP39A1 Gene (Entity type)	ENSG00000146233 - cytochrome P450 family 39 subfamily A member 1
	HS3ST2 Gene (Entity type)	ENSG00000122254 - heparan sulfate-glucosamine 3-sulfotransferase 2
	HPF1 Gene (Entity type)	ENSG00000056050 - histone PARylation factor 1
	TMEM183A Gene (Entity type)	ENSG00000163444 - transmembrane protein 183A

SPCS3

Gene (Entity type)

ENSG00000129128 - signal peptidase complex subunit 3

FBXW2

Gene (Entity type)

ENSG00000119402 - F-box and WD repeat domain containing 2

LPGAT1

Gene (Entity type)

ENSG00000123684 - lysophosphatidylglycerol acyltransferase 1

KHK

Gene (Entity type)

ENSG00000138030 - ketohexokinase

PLA2G12A

Gene (Entity type)

ENSG00000123739 - phospholipase A2 group XIIA

TTC19

Gene (Entity type)

ENSG00000011295 - tetratricopeptide repeat domain 19

CYP39A1

Gene (Entity type)

ENSG00000146233 - cytochrome P450 family 39 subfamily A member 1

HS3ST2

Gene (Entity type)

ENSG00000122254 - heparan sulfate-glucosamine 3-sulfotransferase 2

HPF1

Gene (Entity type)

ENSG00000056050 - histone PARylation factor 1

TMEM183A

Gene (Entity type)

ENSG00000163444 - transmembrane protein 183A

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Community

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.