ATMIN Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with ATMIN Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with ATMIN Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with ATMIN Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with ATMIN Up.

Results found

Linked to

	Label	Description
	PHIP Gene (Entity type)	ENSG00000146247 - PHIP subunit of CUL4-Ring ligase complex
	PTBP2 Gene (Entity type)	ENSG00000117569 - polypyrimidine tract binding protein 2
	CAPZA1 Gene (Entity type)	ENSG00000116489 - capping actin protein of muscle Z-line subunit alpha 1
	ZFAND6 Gene (Entity type)	ENSG00000086666 - zinc finger AN1-type containing 6
	DDX24 Gene (Entity type)	ENSG00000089737 - DEAD-box helicase 24
	RTRAF Gene (Entity type)	ENSG00000087302 - RNA transcription, translation and transport factor
	DYNLRB1 Gene (Entity type)	ENSG00000125971 - dynein light chain roadblock-type 1
	BCL7B Gene (Entity type)	ENSG00000106635 - BAF chromatin remodeling complex subunit BCL7B
	PTPN18 Gene (Entity type)	ENSG00000072135 - protein tyrosine phosphatase non-receptor type 18
	UBA6 Gene (Entity type)	ENSG00000033178 - ubiquitin like modifier activating enzyme 6

PHIP

Gene (Entity type)

ENSG00000146247 - PHIP subunit of CUL4-Ring ligase complex

PTBP2

Gene (Entity type)

ENSG00000117569 - polypyrimidine tract binding protein 2

CAPZA1

Gene (Entity type)

ENSG00000116489 - capping actin protein of muscle Z-line subunit alpha 1

ZFAND6

Gene (Entity type)

ENSG00000086666 - zinc finger AN1-type containing 6

DDX24

Gene (Entity type)

ENSG00000089737 - DEAD-box helicase 24

RTRAF

Gene (Entity type)

ENSG00000087302 - RNA transcription, translation and transport factor

DYNLRB1

Gene (Entity type)

ENSG00000125971 - dynein light chain roadblock-type 1

BCL7B

Gene (Entity type)

ENSG00000106635 - BAF chromatin remodeling complex subunit BCL7B

PTPN18

Gene (Entity type)

ENSG00000072135 - protein tyrosine phosphatase non-receptor type 18

UBA6

Gene (Entity type)

ENSG00000033178 - ubiquitin like modifier activating enzyme 6

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Community

Resources

@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.