ATMIN Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with ATMIN Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with ATMIN Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with ATMIN Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with ATMIN Up.

Results found

Linked to

	Label	Description
	UVRAG Gene (Entity type)	ENSG00000198382 - UV radiation resistance associated
	PHIP Gene (Entity type)	ENSG00000146247 - PHIP subunit of CUL4-Ring ligase complex
	PTBP2 Gene (Entity type)	ENSG00000117569 - polypyrimidine tract binding protein 2
	DDX24 Gene (Entity type)	ENSG00000089737 - DEAD-box helicase 24
	STX16 Gene (Entity type)	ENSG00000124222 - syntaxin 16
	RUNX1T1 Gene (Entity type)	ENSG00000079102 - RUNX1 partner transcriptional co-repressor 1
	NIT2 Gene (Entity type)	ENSG00000114021 - nitrilase family member 2
	TPK1 Gene (Entity type)	ENSG00000196511 - thiamin pyrophosphokinase 1
	RALGPS2 Gene (Entity type)	ENSG00000116191 - Ral GEF with PH domain and SH3 binding motif 2
	TRMT112 Gene (Entity type)	ENSG00000173113 - tRNA methyltransferase activator subunit 11-2

UVRAG

Gene (Entity type)

ENSG00000198382 - UV radiation resistance associated

PHIP

Gene (Entity type)

ENSG00000146247 - PHIP subunit of CUL4-Ring ligase complex

PTBP2

Gene (Entity type)

ENSG00000117569 - polypyrimidine tract binding protein 2

DDX24

Gene (Entity type)

ENSG00000089737 - DEAD-box helicase 24

STX16

Gene (Entity type)

ENSG00000124222 - syntaxin 16

RUNX1T1

Gene (Entity type)

ENSG00000079102 - RUNX1 partner transcriptional co-repressor 1

NIT2

Gene (Entity type)

ENSG00000114021 - nitrilase family member 2

TPK1

Gene (Entity type)

ENSG00000196511 - thiamin pyrophosphokinase 1

RALGPS2

Gene (Entity type)

ENSG00000116191 - Ral GEF with PH domain and SH3 binding motif 2

TRMT112

Gene (Entity type)

ENSG00000173113 - tRNA methyltransferase activator subunit 11-2

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.