AOC3 Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with AOC3 Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with AOC3 Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with AOC3 Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with AOC3 Up.

Results found

Linked to

	Label	Description
	KDM5A Gene (Entity type)	ENSG00000073614 - lysine demethylase 5A
	NCK2 Gene (Entity type)	ENSG00000071051 - NCK adaptor protein 2
	VPS4B Gene (Entity type)	ENSG00000119541 - vacuolar protein sorting 4 homolog B
	ARPC5L Gene (Entity type)	ENSG00000136950 - actin related protein 2/3 complex subunit 5 like
	SOX2 Gene (Entity type)	ENSG00000181449 - SRY-box transcription factor 2
	THOC2 Gene (Entity type)	ENSG00000125676 - THO complex subunit 2
	RPL36AL Gene (Entity type)	ENSG00000165502 - ribosomal protein L36a like
	CSF3R Gene (Entity type)	ENSG00000119535 - colony stimulating factor 3 receptor
	DEFB4A Gene (Entity type)	ENSG00000171711 - defensin beta 4A
	PPP3R1 Gene (Entity type)	ENSG00000221823 - protein phosphatase 3 regulatory subunit B, alpha

KDM5A

Gene (Entity type)

ENSG00000073614 - lysine demethylase 5A

NCK2

Gene (Entity type)

ENSG00000071051 - NCK adaptor protein 2

VPS4B

Gene (Entity type)

ENSG00000119541 - vacuolar protein sorting 4 homolog B

ARPC5L

Gene (Entity type)

ENSG00000136950 - actin related protein 2/3 complex subunit 5 like

SOX2

Gene (Entity type)

ENSG00000181449 - SRY-box transcription factor 2

THOC2

Gene (Entity type)

ENSG00000125676 - THO complex subunit 2

RPL36AL

Gene (Entity type)

ENSG00000165502 - ribosomal protein L36a like

CSF3R

Gene (Entity type)

ENSG00000119535 - colony stimulating factor 3 receptor

DEFB4A

Gene (Entity type)

ENSG00000171711 - defensin beta 4A

PPP3R1

Gene (Entity type)

ENSG00000221823 - protein phosphatase 3 regulatory subunit B, alpha

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.